Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 MT-TF-201ENST00000387314 71 ntBASIC0.6□□□□□ -2.31
MT-ND1P03886 U8.15-201ENST00000390947 134 ntBASIC0.6□□□□□ -2.31
MT-ND1P03886 RNU6-460P-201ENST00000391158 108 ntBASIC0.6□□□□□ -2.31
MT-ND1P03886 Y_RNA.120-201ENST00000363304 110 ntBASIC0.59□□□□□ -2.31
MT-ND1P03886 RNU1-93P-201ENST00000364704 169 ntBASIC0.59□□□□□ -2.31
MT-ND1P03886 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
MT-ND1P03886 RNU1-119P-201ENST00000391122 165 ntBASIC0.59□□□□□ -2.31
MT-ND1P03886 RNA5SP237-201ENST00000410414 113 ntBASIC0.59□□□□□ -2.31
MT-ND1P03886 RNU7-102P-201ENST00000458948 62 ntBASIC0.59□□□□□ -2.31
MT-ND1P03886 MIR4305-201ENST00000583252 102 ntBASIC0.59□□□□□ -2.31
MT-ND1P03886 AL590095.2-201ENST00000604136 117 ntBASIC0.59□□□□□ -2.31
MT-ND1P03886 AC021753.1-201ENST00000635724 168 ntBASIC0.59□□□□□ -2.31
MT-ND1P03886 SNORD115-2-201ENST00000362842 82 ntBASIC0.58□□□□□ -2.32
MT-ND1P03886 RNY1P13-201ENST00000365030 105 ntBASIC0.58□□□□□ -2.32
MT-ND1P03886 SNORD115-20-201ENST00000365099 82 ntBASIC0.58□□□□□ -2.32
MT-ND1P03886 MIR938-201ENST00000401216 83 ntBASIC0.58□□□□□ -2.32
MT-ND1P03886 AL603914.1-201ENST00000401964 204 ntBASIC0.58□□□□□ -2.32
MT-ND1P03886 MIR1257-201ENST00000408490 117 ntBASIC0.58□□□□□ -2.32
MT-ND1P03886 MTATP6P21-201ENST00000440681 189 ntBASIC0.58□□□□□ -2.32
MT-ND1P03886 Y_RNA.690-201ENST00000516603 95 ntBASIC0.58□□□□□ -2.32
MT-ND1P03886 RNU7-156P-201ENST00000517214 74 ntBASIC0.58□□□□□ -2.32
MT-ND1P03886 AC004812.1-201ENST00000540773 146 ntBASIC0.58□□□□□ -2.32
MT-ND1P03886 SNORA4-201ENST00000584302 138 ntBASIC0.58□□□□□ -2.32
MT-ND1P03886 SNORD92-201ENST00000585078 85 ntBASIC0.58□□□□□ -2.32
MT-ND1P03886 AC108081.1-201ENST00000604358 221 ntBASIC0.58□□□□□ -2.32
MT-ND1P03886 AC098479.1-201ENST00000609225 154 ntBASIC0.58□□□□□ -2.32
MT-ND1P03886 AC011603.4-201ENST00000611325 277 ntBASIC0.58□□□□□ -2.32
MT-ND1P03886 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
MT-ND1P03886 AL589743.1-201ENST00000551932 2712 ntBASIC0.57□□□□□ -2.32
MT-ND1P03886 Y_RNA.366-201ENST00000365540 102 ntBASIC0.57□□□□□ -2.32
MT-ND1P03886 RNY1P8-201ENST00000383970 114 ntBASIC0.57□□□□□ -2.32
MT-ND1P03886 MIR573-201ENST00000384964 99 ntBASIC0.57□□□□□ -2.32
MT-ND1P03886 Y_RNA.588-201ENST00000391254 102 ntBASIC0.57□□□□□ -2.32
MT-ND1P03886 SNORD93-201ENST00000408813 74 ntBASIC0.57□□□□□ -2.32
MT-ND1P03886 RNU6-893P-201ENST00000458841 100 ntBASIC0.57□□□□□ -2.32
MT-ND1P03886 RNU7-113P-201ENST00000459273 62 ntBASIC0.57□□□□□ -2.32
MT-ND1P03886 MIR1270-201ENST00000459320 83 ntBASIC0.57□□□□□ -2.32
MT-ND1P03886 AC133485.4-201ENST00000561835 220 ntBASIC0.57□□□□□ -2.32
MT-ND1P03886 AC138907.4-201ENST00000570107 226 ntBASIC0.57□□□□□ -2.32
MT-ND1P03886 MIR8066-201ENST00000617280 78 ntBASIC0.57□□□□□ -2.32
MT-ND1P03886 SNORD18B-201ENST00000365659 72 ntBASIC0.56□□□□□ -2.32
MT-ND1P03886 RNU6-949P-201ENST00000384040 107 ntBASIC0.56□□□□□ -2.32
MT-ND1P03886 Y_RNA.531-201ENST00000384589 121 ntBASIC0.56□□□□□ -2.32
MT-ND1P03886 Y_RNA.555-201ENST00000384673 110 ntBASIC0.56□□□□□ -2.32
MT-ND1P03886 MIR508-201ENST00000384857 115 ntBASIC0.56□□□□□ -2.32
MT-ND1P03886 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
MT-ND1P03886 RNU6-907P-201ENST00000390924 102 ntBASIC0.56□□□□□ -2.32
MT-ND1P03886 AL022718.1-201ENST00000412004 84 ntBASIC0.56□□□□□ -2.32
MT-ND1P03886 RNU7-123P-201ENST00000515911 60 ntBASIC0.56□□□□□ -2.32
MT-ND1P03886 RNU7-79P-201ENST00000516082 62 ntBASIC0.56□□□□□ -2.32
MT-ND1P03886 SNORA25.12-201ENST00000516202 82 ntBASIC0.56□□□□□ -2.32
MT-ND1P03886 RNA5SP121-201ENST00000516537 101 ntBASIC0.56□□□□□ -2.32
MT-ND1P03886 RNA5SP33-201ENST00000516687 98 ntBASIC0.56□□□□□ -2.32
MT-ND1P03886 RNU7-35P-201ENST00000517174 62 ntBASIC0.56□□□□□ -2.32
MT-ND1P03886 MIR3121-201ENST00000579680 77 ntBASIC0.56□□□□□ -2.32
MT-ND1P03886 AC021443.1-201ENST00000604478 211 ntBASIC0.56□□□□□ -2.32
MT-ND1P03886 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.56□□□□□ -2.32
MT-ND1P03886 SNORA32-201ENST00000384072 121 ntBASIC0.55□□□□□ -2.32
MT-ND1P03886 RNU6-364P-201ENST00000384387 107 ntBASIC0.55□□□□□ -2.32
MT-ND1P03886 RNU6-447P-201ENST00000410293 104 ntBASIC0.55□□□□□ -2.32
MT-ND1P03886 RNU6-1118P-201ENST00000410382 104 ntBASIC0.55□□□□□ -2.32
MT-ND1P03886 RNU6-1076P-201ENST00000410397 104 ntBASIC0.55□□□□□ -2.32
MT-ND1P03886 RNU6-355P-201ENST00000410427 104 ntBASIC0.55□□□□□ -2.32
MT-ND1P03886 RNU6-791P-201ENST00000410467 104 ntBASIC0.55□□□□□ -2.32
MT-ND1P03886 RNU6-705P-201ENST00000410601 104 ntBASIC0.55□□□□□ -2.32
MT-ND1P03886 RNU6-1100P-201ENST00000410691 104 ntBASIC0.55□□□□□ -2.32
MT-ND1P03886 RNU6-733P-201ENST00000410759 104 ntBASIC0.55□□□□□ -2.32
MT-ND1P03886 RNU6-860P-201ENST00000410860 104 ntBASIC0.55□□□□□ -2.32
MT-ND1P03886 RNU6-1086P-201ENST00000410930 100 ntBASIC0.55□□□□□ -2.32
MT-ND1P03886 RNA5SP222-201ENST00000411039 105 ntBASIC0.55□□□□□ -2.32
MT-ND1P03886 RNU6-1217P-201ENST00000411276 104 ntBASIC0.55□□□□□ -2.32
MT-ND1P03886 RNU6-785P-201ENST00000411324 104 ntBASIC0.55□□□□□ -2.32
MT-ND1P03886 RNU7-164P-201ENST00000459221 62 ntBASIC0.55□□□□□ -2.32
MT-ND1P03886 RNU5E-3P-201ENST00000515913 68 ntBASIC0.55□□□□□ -2.32
MT-ND1P03886 RNA5SP272-201ENST00000516095 111 ntBASIC0.55□□□□□ -2.32
MT-ND1P03886 RNU4-54P-201ENST00000516428 129 ntBASIC0.55□□□□□ -2.32
MT-ND1P03886 MIR3612-201ENST00000579753 87 ntBASIC0.55□□□□□ -2.32
MT-ND1P03886 AC090897.1-201ENST00000580909 226 ntBASIC0.55□□□□□ -2.32
MT-ND1P03886 MIR4491-201ENST00000581087 68 ntBASIC0.55□□□□□ -2.32
MT-ND1P03886 MIR548AE2-201ENST00000583456 67 ntBASIC0.55□□□□□ -2.32
MT-ND1P03886 U6.90-201ENST00000614007 104 ntBASIC0.55□□□□□ -2.32
MT-ND1P03886 U6.70-201ENST00000620287 104 ntBASIC0.55□□□□□ -2.32
MT-ND1P03886 Y_RNA.42-201ENST00000362660 108 ntBASIC0.54□□□□□ -2.32
MT-ND1P03886 Y_RNA.170-201ENST00000363746 110 ntBASIC0.54□□□□□ -2.32
MT-ND1P03886 Y_RNA.180-201ENST00000363867 113 ntBASIC0.54□□□□□ -2.32
MT-ND1P03886 Y_RNA.215-201ENST00000364204 112 ntBASIC0.54□□□□□ -2.32
MT-ND1P03886 RNU6-915P-201ENST00000364943 103 ntBASIC0.54□□□□□ -2.32
MT-ND1P03886 Y_RNA.400-201ENST00000383963 111 ntBASIC0.54□□□□□ -2.32
MT-ND1P03886 RNU6-1104P-201ENST00000384723 104 ntBASIC0.54□□□□□ -2.32
MT-ND1P03886 MIR569-201ENST00000385228 96 ntBASIC0.54□□□□□ -2.32
MT-ND1P03886 RNU4-83P-201ENST00000410863 133 ntBASIC0.54□□□□□ -2.32
MT-ND1P03886 AL157398.1-201ENST00000452981 186 ntBASIC0.54□□□□□ -2.32
MT-ND1P03886 IGKV1-22-201ENST00000524313 326 ntBASIC0.54□□□□□ -2.32
MT-ND1P03886 AC018659.1-201ENST00000551083 169 ntBASIC0.54□□□□□ -2.32
MT-ND1P03886 AC133485.1-201ENST00000567176 124 ntBASIC0.54□□□□□ -2.32
MT-ND1P03886 AC138907.6-201ENST00000568401 126 ntBASIC0.54□□□□□ -2.32
MT-ND1P03886 MIR548X2-201ENST00000579776 100 ntBASIC0.54□□□□□ -2.32
MT-ND1P03886 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
MT-ND1P03886 Y_RNA.13-201ENST00000362403 112 ntBASIC0.53□□□□□ -2.32
MT-ND1P03886 Y_RNA.294-201ENST00000364916 102 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 227.7 ms