Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 SNORD114-10-201ENST00000363409 72 ntBASIC-1.09□□□□□ -2.58
ABCA1O95477 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.09□□□□□ -2.58
ABCA1O95477 SNORD61-201ENST00000384252 73 ntBASIC-1.09□□□□□ -2.58
ABCA1O95477 MIR3139-201ENST00000579145 76 ntBASIC-1.09□□□□□ -2.58
ABCA1O95477 MIR548AE1-201ENST00000583292 70 ntBASIC-1.09□□□□□ -2.58
ABCA1O95477 AC093783.1-201ENST00000612976 329 ntBASIC-1.09□□□□□ -2.58
ABCA1O95477 RNU6-704P-201ENST00000364162 103 ntBASIC-1.09□□□□□ -2.58
ABCA1O95477 SNORD74.6-201ENST00000364796 70 ntBASIC-1.09□□□□□ -2.58
ABCA1O95477 MIR29B1-201ENST00000385015 81 ntBASIC-1.09□□□□□ -2.58
ABCA1O95477 MIR507-201ENST00000385234 94 ntBASIC-1.09□□□□□ -2.58
ABCA1O95477 AC024067.1-201ENST00000426199 223 ntBASIC-1.09□□□□□ -2.58
ABCA1O95477 MTND1P2-201ENST00000430604 821 ntBASIC-1.09□□□□□ -2.58
ABCA1O95477 AC098479.1-201ENST00000609225 154 ntBASIC-1.09□□□□□ -2.58
ABCA1O95477 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.09□□□□□ -2.58
ABCA1O95477 MIR664B-201ENST00000626756 61 ntBASIC-1.09□□□□□ -2.58
ABCA1O95477 MIR3662-201ENST00000637030 95 ntBASIC-1.09□□□□□ -2.58
ABCA1O95477 Y_RNA.72-201ENST00000362894 103 ntBASIC-1.1□□□□□ -2.59
ABCA1O95477 RNU6-1059P-201ENST00000363752 98 ntBASIC-1.1□□□□□ -2.59
ABCA1O95477 Y_RNA.373-201ENST00000365600 103 ntBASIC-1.1□□□□□ -2.59
ABCA1O95477 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.1□□□□□ -2.59
ABCA1O95477 RNU7-45P-201ENST00000459460 63 ntBASIC-1.1□□□□□ -2.59
ABCA1O95477 SERF1AP1-201ENST00000514575 187 ntBASIC-1.1□□□□□ -2.59
ABCA1O95477 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.1□□□□□ -2.59
ABCA1O95477 Y_RNA.530-201ENST00000384587 101 ntBASIC-1.1□□□□□ -2.59
ABCA1O95477 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.1□□□□□ -2.59
ABCA1O95477 AL590004.1-201ENST00000405321 300 ntBASIC-1.1□□□□□ -2.59
ABCA1O95477 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.1□□□□□ -2.59
ABCA1O95477 RNU6-408P-201ENST00000515910 100 ntBASIC-1.1□□□□□ -2.59
ABCA1O95477 RNU6-1016P-201ENST00000516689 94 ntBASIC-1.1□□□□□ -2.59
ABCA1O95477 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.1□□□□□ -2.59
ABCA1O95477 MIR4724-201ENST00000579485 89 ntBASIC-1.1□□□□□ -2.59
ABCA1O95477 PART1_1.1-201ENST00000611761 217 ntBASIC-1.1□□□□□ -2.59
ABCA1O95477 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.11□□□□□ -2.59
ABCA1O95477 RNU6-1252P-201ENST00000363054 104 ntBASIC-1.11□□□□□ -2.59
ABCA1O95477 RNU6-164P-201ENST00000364604 103 ntBASIC-1.11□□□□□ -2.59
ABCA1O95477 SNORD116-11-201ENST00000383882 92 ntBASIC-1.11□□□□□ -2.59
ABCA1O95477 RNU6-365P-201ENST00000517113 106 ntBASIC-1.11□□□□□ -2.59
ABCA1O95477 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.11□□□□□ -2.59
ABCA1O95477 MIR4756-201ENST00000577874 78 ntBASIC-1.11□□□□□ -2.59
ABCA1O95477 AL049861.1-201ENST00000603130 150 ntBASIC-1.11□□□□□ -2.59
ABCA1O95477 AC011476.5-201ENST00000615594 130 ntBASIC-1.11□□□□□ -2.59
ABCA1O95477 RNU6-1090P-201ENST00000364065 94 ntBASIC-1.12□□□□□ -2.59
ABCA1O95477 RNU6-879P-201ENST00000364328 108 ntBASIC-1.12□□□□□ -2.59
ABCA1O95477 RNU6-593P-201ENST00000364716 112 ntBASIC-1.12□□□□□ -2.59
ABCA1O95477 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.12□□□□□ -2.59
ABCA1O95477 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.12□□□□□ -2.59
ABCA1O95477 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.12□□□□□ -2.59
ABCA1O95477 MIR487B-201ENST00000385021 84 ntBASIC-1.12□□□□□ -2.59
ABCA1O95477 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.12□□□□□ -2.59
ABCA1O95477 SNORD36C-201ENST00000516733 66 ntBASIC-1.12□□□□□ -2.59
ABCA1O95477 AC068339.1-201ENST00000526965 141 ntBASIC-1.12□□□□□ -2.59
ABCA1O95477 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.12□□□□□ -2.59
ABCA1O95477 AL121655.1-201ENST00000605811 308 ntBASIC-1.12□□□□□ -2.59
ABCA1O95477 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.12□□□□□ -2.59
ABCA1O95477 Y_RNA.505-201ENST00000384489 102 ntBASIC-1.12□□□□□ -2.59
ABCA1O95477 SNORA40.17-201ENST00000517256 115 ntBASIC-1.12□□□□□ -2.59
ABCA1O95477 MIR3920-201ENST00000581751 86 ntBASIC-1.12□□□□□ -2.59
ABCA1O95477 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.12□□□□□ -2.59
ABCA1O95477 AL008718.3-201ENST00000610217 321 ntBASIC-1.12□□□□□ -2.59
ABCA1O95477 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.12□□□□□ -2.59
ABCA1O95477 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.12□□□□□ -2.59
ABCA1O95477 AC099654.14-201ENST00000638599 341 ntBASIC-1.12□□□□□ -2.59
ABCA1O95477 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.13□□□□□ -2.59
ABCA1O95477 SNORD115-27-201ENST00000364430 82 ntBASIC-1.13□□□□□ -2.59
ABCA1O95477 Y_RNA.454-201ENST00000384224 113 ntBASIC-1.13□□□□□ -2.59
ABCA1O95477 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.13□□□□□ -2.59
ABCA1O95477 RNU6-466P-201ENST00000391224 103 ntBASIC-1.13□□□□□ -2.59
ABCA1O95477 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.13□□□□□ -2.59
ABCA1O95477 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.13□□□□□ -2.59
ABCA1O95477 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.13□□□□□ -2.59
ABCA1O95477 MTATP6P24-201ENST00000576835 677 ntBASIC-1.13□□□□□ -2.59
ABCA1O95477 AC013791.1-201ENST00000616619 62 ntBASIC-1.13□□□□□ -2.59
ABCA1O95477 AC124864.2-201ENST00000624736 186 ntBASIC-1.13□□□□□ -2.59
ABCA1O95477 SNORD115-25-201ENST00000362619 82 ntBASIC-1.13□□□□□ -2.59
ABCA1O95477 Y_RNA.404-201ENST00000383978 102 ntBASIC-1.13□□□□□ -2.59
ABCA1O95477 RNU6-484P-201ENST00000384016 107 ntBASIC-1.13□□□□□ -2.59
ABCA1O95477 RNU6-154P-201ENST00000384306 106 ntBASIC-1.13□□□□□ -2.59
ABCA1O95477 AL078595.1-201ENST00000404458 226 ntBASIC-1.13□□□□□ -2.59
ABCA1O95477 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.13□□□□□ -2.59
ABCA1O95477 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.13□□□□□ -2.59
ABCA1O95477 AC145423.2-201ENST00000610631 239 ntBASIC-1.13□□□□□ -2.59
ABCA1O95477 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.14□□□□□ -2.59
ABCA1O95477 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.14□□□□□ -2.59
ABCA1O95477 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.14□□□□□ -2.59
ABCA1O95477 AC005899.2-201ENST00000584353 90 ntBASIC-1.14□□□□□ -2.59
ABCA1O95477 TPTEP1-208ENST00000636884 213 ntBASIC-1.14□□□□□ -2.59
ABCA1O95477 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.14□□□□□ -2.59
ABCA1O95477 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.14□□□□□ -2.59
ABCA1O95477 RNU6-571P-201ENST00000384128 107 ntBASIC-1.14□□□□□ -2.59
ABCA1O95477 MIRLET7B-201ENST00000385140 83 ntBASIC-1.14□□□□□ -2.59
ABCA1O95477 SNORD75.2-201ENST00000408784 58 ntBASIC-1.14□□□□□ -2.59
ABCA1O95477 AC093423.1-201ENST00000440817 142 ntBASIC-1.14□□□□□ -2.59
ABCA1O95477 SNORD67.1-201ENST00000516618 108 ntBASIC-1.14□□□□□ -2.59
ABCA1O95477 YWHAEP2-201ENST00000580066 112 ntBASIC-1.14□□□□□ -2.59
ABCA1O95477 MIR4308-201ENST00000580634 81 ntBASIC-1.14□□□□□ -2.59
ABCA1O95477 NBR2-204ENST00000587322 63 ntBASIC-1.14□□□□□ -2.59
ABCA1O95477 AC107308.1-201ENST00000615897 301 ntBASIC-1.14□□□□□ -2.59
ABCA1O95477 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.15□□□□□ -2.59
ABCA1O95477 Y_RNA.230-201ENST00000364348 109 ntBASIC-1.15□□□□□ -2.59
ABCA1O95477 Y_RNA.414-201ENST00000384011 101 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms