Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
PRPF40AO75400 MIR377-201ENST00000362145 69 ntBASIC1.94□□□□□ -2.1
PRPF40AO75400 Y_RNA.330-201ENST00000365230 109 ntBASIC1.94□□□□□ -2.1
PRPF40AO75400 SNORA7.5-201ENST00000410672 110 ntBASIC1.94□□□□□ -2.1
PRPF40AO75400 AC141846.1-201ENST00000568348 142 ntBASIC1.94□□□□□ -2.1
PRPF40AO75400 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.94□□□□□ -2.1
PRPF40AO75400 MIR450A1-201ENST00000362262 91 ntBASIC1.93□□□□□ -2.1
PRPF40AO75400 RNU6-654P-201ENST00000364373 107 ntBASIC1.93□□□□□ -2.1
PRPF40AO75400 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.93□□□□□ -2.1
PRPF40AO75400 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.93□□□□□ -2.1
PRPF40AO75400 RNU6-482P-201ENST00000391068 107 ntBASIC1.93□□□□□ -2.1
PRPF40AO75400 RNU6-733P-201ENST00000410759 104 ntBASIC1.93□□□□□ -2.1
PRPF40AO75400 SEPT14P17-201ENST00000617978 177 ntBASIC1.93□□□□□ -2.1
PRPF40AO75400 AC084768.2-201ENST00000622736 221 ntBASIC1.93□□□□□ -2.1
PRPF40AO75400 RNU6-147P-201ENST00000383983 107 ntBASIC1.92□□□□□ -2.1
PRPF40AO75400 SNORA51.5-201ENST00000384126 131 ntBASIC1.92□□□□□ -2.1
PRPF40AO75400 RNU6-1113P-201ENST00000384348 107 ntBASIC1.92□□□□□ -2.1
PRPF40AO75400 RNU6-1165P-201ENST00000410119 107 ntBASIC1.92□□□□□ -2.1
PRPF40AO75400 RNA5SP95-201ENST00000410319 137 ntBASIC1.92□□□□□ -2.1
PRPF40AO75400 RNU7-2P-201ENST00000516096 62 ntBASIC1.92□□□□□ -2.1
PRPF40AO75400 SNORD67.1-201ENST00000516618 108 ntBASIC1.92□□□□□ -2.1
PRPF40AO75400 RNU6-521P-201ENST00000516663 105 ntBASIC1.92□□□□□ -2.1
PRPF40AO75400 MIR6740-201ENST00000618268 113 ntBASIC1.92□□□□□ -2.1
PRPF40AO75400 RNU6-756P-201ENST00000383997 107 ntBASIC1.91□□□□□ -2.1
PRPF40AO75400 AC141557.1-201ENST00000540982 400 ntBASIC1.91□□□□□ -2.1
PRPF40AO75400 MIR8081-201ENST00000611533 95 ntBASIC1.91□□□□□ -2.1
PRPF40AO75400 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
PRPF40AO75400 RNU1-17P-201ENST00000363022 152 ntBASIC1.9□□□□□ -2.11
PRPF40AO75400 RNY1P13-201ENST00000365030 105 ntBASIC1.9□□□□□ -2.11
PRPF40AO75400 SNORA2B-201ENST00000384583 137 ntBASIC1.9□□□□□ -2.11
PRPF40AO75400 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.9□□□□□ -2.11
PRPF40AO75400 SNORA25.15-201ENST00000516487 89 ntBASIC1.9□□□□□ -2.11
PRPF40AO75400 RNU6-766P-201ENST00000362478 107 ntBASIC1.89□□□□□ -2.11
PRPF40AO75400 SNORD114-10-201ENST00000363409 72 ntBASIC1.89□□□□□ -2.11
PRPF40AO75400 SNORD115-35-201ENST00000365122 82 ntBASIC1.89□□□□□ -2.11
PRPF40AO75400 MIR206-201ENST00000384872 86 ntBASIC1.89□□□□□ -2.11
PRPF40AO75400 MRPL35P3-201ENST00000421557 364 ntBASIC1.89□□□□□ -2.11
PRPF40AO75400 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.89□□□□□ -2.11
PRPF40AO75400 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.89□□□□□ -2.11
PRPF40AO75400 MIR4255-201ENST00000579351 72 ntBASIC1.89□□□□□ -2.11
PRPF40AO75400 SNORA4-201ENST00000584302 138 ntBASIC1.89□□□□□ -2.11
PRPF40AO75400 AL512310.12-203ENST00000640543 90 ntBASIC1.89□□□□□ -2.11
PRPF40AO75400 MIR563-201ENST00000385080 79 ntBASIC1.88□□□□□ -2.11
PRPF40AO75400 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.88□□□□□ -2.11
PRPF40AO75400 RNU7-137P-201ENST00000516788 62 ntBASIC1.88□□□□□ -2.11
PRPF40AO75400 AC105081.1-201ENST00000617727 106 ntBASIC1.88□□□□□ -2.11
PRPF40AO75400 Y_RNA.168-201ENST00000363740 102 ntBASIC1.87□□□□□ -2.11
PRPF40AO75400 RNU4-36P-201ENST00000364294 144 ntBASIC1.87□□□□□ -2.11
PRPF40AO75400 RNU6-32P-201ENST00000383948 107 ntBASIC1.87□□□□□ -2.11
PRPF40AO75400 RNU6-949P-201ENST00000384040 107 ntBASIC1.87□□□□□ -2.11
PRPF40AO75400 Y_RNA.448-201ENST00000384185 108 ntBASIC1.87□□□□□ -2.11
PRPF40AO75400 RNU6-13P-201ENST00000384248 107 ntBASIC1.87□□□□□ -2.11
PRPF40AO75400 RNU6-12P-201ENST00000384604 107 ntBASIC1.87□□□□□ -2.11
PRPF40AO75400 RNU6-41P-201ENST00000384741 107 ntBASIC1.87□□□□□ -2.11
PRPF40AO75400 MIR605-201ENST00000385078 83 ntBASIC1.87□□□□□ -2.11
PRPF40AO75400 RNU6-910P-201ENST00000390844 107 ntBASIC1.87□□□□□ -2.11
PRPF40AO75400 SNORA75.2-201ENST00000391138 150 ntBASIC1.87□□□□□ -2.11
PRPF40AO75400 SNORA75.3-201ENST00000391231 150 ntBASIC1.87□□□□□ -2.11
PRPF40AO75400 AL591704.2-201ENST00000421658 181 ntBASIC1.87□□□□□ -2.11
PRPF40AO75400 MIR3613-201ENST00000579844 87 ntBASIC1.87□□□□□ -2.11
PRPF40AO75400 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
PRPF40AO75400 RNU6-865P-201ENST00000364772 107 ntBASIC1.86□□□□□ -2.11
PRPF40AO75400 Y_RNA.360-201ENST00000365512 102 ntBASIC1.86□□□□□ -2.11
PRPF40AO75400 SNORA80D-201ENST00000384488 135 ntBASIC1.86□□□□□ -2.11
PRPF40AO75400 MT-TF-201ENST00000387314 71 ntBASIC1.86□□□□□ -2.11
PRPF40AO75400 RNU6-447P-201ENST00000410293 104 ntBASIC1.86□□□□□ -2.11
PRPF40AO75400 RNU6-1118P-201ENST00000410382 104 ntBASIC1.86□□□□□ -2.11
PRPF40AO75400 RNU6-1076P-201ENST00000410397 104 ntBASIC1.86□□□□□ -2.11
PRPF40AO75400 RNU6-355P-201ENST00000410427 104 ntBASIC1.86□□□□□ -2.11
PRPF40AO75400 RNU6-791P-201ENST00000410467 104 ntBASIC1.86□□□□□ -2.11
PRPF40AO75400 RNU6-705P-201ENST00000410601 104 ntBASIC1.86□□□□□ -2.11
PRPF40AO75400 RNU6-1100P-201ENST00000410691 104 ntBASIC1.86□□□□□ -2.11
PRPF40AO75400 RNU6-860P-201ENST00000410860 104 ntBASIC1.86□□□□□ -2.11
PRPF40AO75400 RNU6-1217P-201ENST00000411276 104 ntBASIC1.86□□□□□ -2.11
PRPF40AO75400 RNU6-785P-201ENST00000411324 104 ntBASIC1.86□□□□□ -2.11
PRPF40AO75400 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.86□□□□□ -2.11
PRPF40AO75400 AC133485.1-201ENST00000567176 124 ntBASIC1.86□□□□□ -2.11
PRPF40AO75400 U6.90-201ENST00000614007 104 ntBASIC1.86□□□□□ -2.11
PRPF40AO75400 U6.70-201ENST00000620287 104 ntBASIC1.86□□□□□ -2.11
PRPF40AO75400 Y_RNA.328-201ENST00000365208 113 ntBASIC1.85□□□□□ -2.11
PRPF40AO75400 RNA5SP190-201ENST00000365222 118 ntBASIC1.85□□□□□ -2.11
PRPF40AO75400 RNU6-997P-201ENST00000384725 107 ntBASIC1.85□□□□□ -2.11
PRPF40AO75400 RNU6-679P-201ENST00000391003 106 ntBASIC1.85□□□□□ -2.11
PRPF40AO75400 DEFB131E-201ENST00000532329 154 ntBASIC1.85□□□□□ -2.11
PRPF40AO75400 MIR4694-201ENST00000578534 80 ntBASIC1.85□□□□□ -2.11
PRPF40AO75400 MIR502-201ENST00000606349 86 ntBASIC1.85□□□□□ -2.11
PRPF40AO75400 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.85□□□□□ -2.11
PRPF40AO75400 MIR30D-201ENST00000362283 70 ntBASIC1.84□□□□□ -2.11
PRPF40AO75400 RNY3P2-201ENST00000362918 102 ntBASIC1.84□□□□□ -2.11
PRPF40AO75400 Y_RNA.78-201ENST00000362970 110 ntBASIC1.84□□□□□ -2.11
PRPF40AO75400 SNORD113.3-201ENST00000364630 78 ntBASIC1.84□□□□□ -2.11
PRPF40AO75400 RNU6-580P-201ENST00000365159 107 ntBASIC1.84□□□□□ -2.11
PRPF40AO75400 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.84□□□□□ -2.11
PRPF40AO75400 SNORD13-201ENST00000459299 104 ntBASIC1.84□□□□□ -2.11
PRPF40AO75400 RNU6-1018P-201ENST00000516577 106 ntBASIC1.84□□□□□ -2.11
PRPF40AO75400 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.84□□□□□ -2.11
PRPF40AO75400 Y_RNA.10-201ENST00000362371 110 ntBASIC1.83□□□□□ -2.12
PRPF40AO75400 Y_RNA.140-201ENST00000363474 103 ntBASIC1.83□□□□□ -2.12
PRPF40AO75400 Y_RNA.363-201ENST00000365529 113 ntBASIC1.83□□□□□ -2.12
PRPF40AO75400 Y_RNA.495-201ENST00000384435 112 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 235.6 ms