Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 RN7SL660P-201ENST00000614852 299 ntBASIC-0.78□□□□□ -2.53
GMDSO60547 snoU18.1-201ENST00000629629 71 ntBASIC-0.78□□□□□ -2.53
GMDSO60547 AC073869.6-201ENST00000640656 341 ntBASIC-0.78□□□□□ -2.53
GMDSO60547 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.78□□□□□ -2.53
GMDSO60547 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.79□□□□□ -2.54
GMDSO60547 Y_RNA.318-201ENST00000365131 97 ntBASIC-0.79□□□□□ -2.54
GMDSO60547 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.79□□□□□ -2.54
GMDSO60547 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.79□□□□□ -2.54
GMDSO60547 SNORD75.1-201ENST00000408373 60 ntBASIC-0.79□□□□□ -2.54
GMDSO60547 AL731563.1-201ENST00000442202 214 ntBASIC-0.79□□□□□ -2.54
GMDSO60547 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.79□□□□□ -2.54
GMDSO60547 MIR548H5-201ENST00000580314 60 ntBASIC-0.79□□□□□ -2.54
GMDSO60547 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.8□□□□□ -2.54
GMDSO60547 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.8□□□□□ -2.54
GMDSO60547 RNU6-876P-201ENST00000391295 104 ntBASIC-0.8□□□□□ -2.54
GMDSO60547 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.8□□□□□ -2.54
GMDSO60547 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.8□□□□□ -2.54
GMDSO60547 MIR4636-201ENST00000582271 80 ntBASIC-0.8□□□□□ -2.54
GMDSO60547 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.8□□□□□ -2.54
GMDSO60547 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.8□□□□□ -2.54
GMDSO60547 Y_RNA.187-201ENST00000363918 113 ntBASIC-0.81□□□□□ -2.54
GMDSO60547 Y_RNA.252-201ENST00000364556 101 ntBASIC-0.81□□□□□ -2.54
GMDSO60547 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.81□□□□□ -2.54
GMDSO60547 MT-TL1-201ENST00000386347 75 ntBASIC-0.81□□□□□ -2.54
GMDSO60547 SNORD115-46-201ENST00000390982 71 ntBASIC-0.81□□□□□ -2.54
GMDSO60547 AL022718.1-201ENST00000412004 84 ntBASIC-0.81□□□□□ -2.54
GMDSO60547 AC112487.2-201ENST00000637950 304 ntBASIC-0.81□□□□□ -2.54
GMDSO60547 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.81□□□□□ -2.54
GMDSO60547 SNORA25.1-201ENST00000362326 128 ntBASIC-0.82□□□□□ -2.54
GMDSO60547 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.82□□□□□ -2.54
GMDSO60547 SNORD114-14-201ENST00000362723 75 ntBASIC-0.82□□□□□ -2.54
GMDSO60547 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.82□□□□□ -2.54
GMDSO60547 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.82□□□□□ -2.54
GMDSO60547 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.82□□□□□ -2.54
GMDSO60547 MTND4P19-201ENST00000446659 478 ntBASIC-0.82□□□□□ -2.54
GMDSO60547 RNU6-277P-201ENST00000516272 106 ntBASIC-0.82□□□□□ -2.54
GMDSO60547 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.82□□□□□ -2.54
GMDSO60547 AC096720.1-201ENST00000604441 183 ntBASIC-0.82□□□□□ -2.54
GMDSO60547 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.83□□□□□ -2.54
GMDSO60547 RNU6-290P-201ENST00000365212 101 ntBASIC-0.83□□□□□ -2.54
GMDSO60547 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.83□□□□□ -2.54
GMDSO60547 MIR599-201ENST00000385069 95 ntBASIC-0.83□□□□□ -2.54
GMDSO60547 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.83□□□□□ -2.54
GMDSO60547 SNORA53-201ENST00000391141 249 ntBASIC-0.83□□□□□ -2.54
GMDSO60547 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.83□□□□□ -2.54
GMDSO60547 AC098479.1-201ENST00000609225 154 ntBASIC-0.83□□□□□ -2.54
GMDSO60547 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.84□□□□□ -2.54
GMDSO60547 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.84□□□□□ -2.54
GMDSO60547 SNORA32-201ENST00000384072 121 ntBASIC-0.84□□□□□ -2.54
GMDSO60547 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.84□□□□□ -2.54
GMDSO60547 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.84□□□□□ -2.54
GMDSO60547 SNORA3B-201ENST00000391305 131 ntBASIC-0.84□□□□□ -2.54
GMDSO60547 AL606845.1-201ENST00000404881 255 ntBASIC-0.84□□□□□ -2.54
GMDSO60547 RNU7-152P-201ENST00000458982 64 ntBASIC-0.84□□□□□ -2.54
GMDSO60547 TRAJ51-201ENST00000504127 63 ntBASIC-0.84□□□□□ -2.54
GMDSO60547 SNORD67.1-201ENST00000516618 108 ntBASIC-0.84□□□□□ -2.54
GMDSO60547 RNU7-137P-201ENST00000516788 62 ntBASIC-0.84□□□□□ -2.54
GMDSO60547 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.84□□□□□ -2.54
GMDSO60547 AL359881.1-201ENST00000602916 267 ntBASIC-0.84□□□□□ -2.54
GMDSO60547 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.85□□□□□ -2.55
GMDSO60547 SNORA63.7-201ENST00000365579 123 ntBASIC-0.85□□□□□ -2.55
GMDSO60547 RNU6-449P-201ENST00000383914 107 ntBASIC-0.85□□□□□ -2.55
GMDSO60547 SNORD116-4-201ENST00000384733 96 ntBASIC-0.85□□□□□ -2.55
GMDSO60547 RNU6-976P-201ENST00000516086 111 ntBASIC-0.85□□□□□ -2.55
GMDSO60547 SNORA27.4-201ENST00000516650 95 ntBASIC-0.85□□□□□ -2.55
GMDSO60547 RNU6-453P-201ENST00000516819 85 ntBASIC-0.85□□□□□ -2.55
GMDSO60547 RNU7-188P-201ENST00000517063 64 ntBASIC-0.85□□□□□ -2.55
GMDSO60547 RNA5SP169-201ENST00000517268 117 ntBASIC-0.85□□□□□ -2.55
GMDSO60547 MIR4473-201ENST00000583731 91 ntBASIC-0.85□□□□□ -2.55
GMDSO60547 AL365205.2-201ENST00000594586 68 ntBASIC-0.85□□□□□ -2.55
GMDSO60547 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.86□□□□□ -2.55
GMDSO60547 RNU6-326P-201ENST00000365480 107 ntBASIC-0.86□□□□□ -2.55
GMDSO60547 RNU6-211P-201ENST00000384047 107 ntBASIC-0.86□□□□□ -2.55
GMDSO60547 MIR604-201ENST00000384880 94 ntBASIC-0.86□□□□□ -2.55
GMDSO60547 FGF7P6-202ENST00000451282 293 ntBASIC-0.86□□□□□ -2.55
GMDSO60547 RNU7-74P-201ENST00000459104 62 ntBASIC-0.86□□□□□ -2.55
GMDSO60547 RNA5SP66-201ENST00000517178 101 ntBASIC-0.86□□□□□ -2.55
GMDSO60547 MIR1302-1-201ENST00000637932 143 ntBASIC-0.86□□□□□ -2.55
GMDSO60547 RNU4-73P-201ENST00000363164 141 ntBASIC-0.87□□□□□ -2.55
GMDSO60547 RNU6-429P-201ENST00000384582 108 ntBASIC-0.87□□□□□ -2.55
GMDSO60547 MIR635-201ENST00000384830 98 ntBASIC-0.87□□□□□ -2.55
GMDSO60547 SNORA79-201ENST00000408376 140 ntBASIC-0.87□□□□□ -2.55
GMDSO60547 RNU7-113P-201ENST00000459273 62 ntBASIC-0.87□□□□□ -2.55
GMDSO60547 AC082651.2-201ENST00000496833 166 ntBASIC-0.87□□□□□ -2.55
GMDSO60547 RNA5SP33-201ENST00000516687 98 ntBASIC-0.87□□□□□ -2.55
GMDSO60547 RNU6-570P-201ENST00000517051 105 ntBASIC-0.87□□□□□ -2.55
GMDSO60547 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.87□□□□□ -2.55
GMDSO60547 MIR3920-201ENST00000581751 86 ntBASIC-0.87□□□□□ -2.55
GMDSO60547 AC006504.6-201ENST00000590142 199 ntBASIC-0.87□□□□□ -2.55
GMDSO60547 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-0.87□□□□□ -2.55
GMDSO60547 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.88□□□□□ -2.55
GMDSO60547 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.88□□□□□ -2.55
GMDSO60547 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.88□□□□□ -2.55
GMDSO60547 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.88□□□□□ -2.55
GMDSO60547 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.88□□□□□ -2.55
GMDSO60547 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.88□□□□□ -2.55
GMDSO60547 RNU6-121P-201ENST00000410525 99 ntBASIC-0.88□□□□□ -2.55
GMDSO60547 RNA5SP144-201ENST00000410846 116 ntBASIC-0.88□□□□□ -2.55
GMDSO60547 AC097635.1-201ENST00000450678 155 ntBASIC-0.88□□□□□ -2.55
GMDSO60547 SCARNA15-202ENST00000516881 127 ntBASIC-0.88□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms