Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 MIR588-201ENST00000384900 83 ntBASIC1.1□□□□□ -2.23
LDB2O43679 MIR222-201ENST00000384992 110 ntBASIC1.1□□□□□ -2.23
LDB2O43679 MIR1285-1-201ENST00000408593 84 ntBASIC1.1□□□□□ -2.23
LDB2O43679 RNA5SP95-201ENST00000410319 137 ntBASIC1.1□□□□□ -2.23
LDB2O43679 RNU7-62P-201ENST00000458856 62 ntBASIC1.1□□□□□ -2.23
LDB2O43679 RPS23P4-201ENST00000487908 423 ntBASIC1.1□□□□□ -2.23
LDB2O43679 RNU6-479P-201ENST00000516348 105 ntBASIC1.1□□□□□ -2.23
LDB2O43679 RNA5SP33-201ENST00000516687 98 ntBASIC1.1□□□□□ -2.23
LDB2O43679 MIR4295-201ENST00000585286 85 ntBASIC1.1□□□□□ -2.23
LDB2O43679 AL365222.1-201ENST00000614661 98 ntBASIC1.1□□□□□ -2.23
LDB2O43679 MIR3914-2-201ENST00000637339 95 ntBASIC1.1□□□□□ -2.23
LDB2O43679 Y_RNA.116-201ENST00000363292 103 ntBASIC1.09□□□□□ -2.23
LDB2O43679 Y_RNA.118-201ENST00000363300 101 ntBASIC1.09□□□□□ -2.23
LDB2O43679 Y_RNA.198-201ENST00000364013 98 ntBASIC1.09□□□□□ -2.23
LDB2O43679 Y_RNA.213-201ENST00000364178 111 ntBASIC1.09□□□□□ -2.23
LDB2O43679 Y_RNA.299-201ENST00000364973 94 ntBASIC1.09□□□□□ -2.23
LDB2O43679 Y_RNA.346-201ENST00000365385 112 ntBASIC1.09□□□□□ -2.23
LDB2O43679 SNORD114-22-201ENST00000365423 72 ntBASIC1.09□□□□□ -2.23
LDB2O43679 Y_RNA.525-201ENST00000384570 113 ntBASIC1.09□□□□□ -2.23
LDB2O43679 Y_RNA.528-201ENST00000384575 108 ntBASIC1.09□□□□□ -2.23
LDB2O43679 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
LDB2O43679 RNU6-1168P-201ENST00000390831 104 ntBASIC1.09□□□□□ -2.23
LDB2O43679 AC087343.1-201ENST00000477341 475 ntBASIC1.09□□□□□ -2.23
LDB2O43679 AC022523.2-201ENST00000561045 150 ntBASIC1.09□□□□□ -2.23
LDB2O43679 MIR6740-201ENST00000618268 113 ntBASIC1.09□□□□□ -2.23
LDB2O43679 AC027335.2-201ENST00000624030 375 ntBASIC1.09□□□□□ -2.23
LDB2O43679 U6.95-201ENST00000636931 70 ntBASIC1.09□□□□□ -2.23
LDB2O43679 MIR96-201ENST00000362288 78 ntBASIC1.08□□□□□ -2.24
LDB2O43679 SNORD113.3-201ENST00000364630 78 ntBASIC1.08□□□□□ -2.24
LDB2O43679 Y_RNA.355-201ENST00000365462 98 ntBASIC1.08□□□□□ -2.24
LDB2O43679 SNORA18-201ENST00000384416 132 ntBASIC1.08□□□□□ -2.24
LDB2O43679 Y_RNA.508-201ENST00000384502 114 ntBASIC1.08□□□□□ -2.24
LDB2O43679 SNORA2B-201ENST00000384583 137 ntBASIC1.08□□□□□ -2.24
LDB2O43679 MIR563-201ENST00000385080 79 ntBASIC1.08□□□□□ -2.24
LDB2O43679 RNA5SP237-201ENST00000410414 113 ntBASIC1.08□□□□□ -2.24
LDB2O43679 Y_RNA.630-201ENST00000411370 108 ntBASIC1.08□□□□□ -2.24
LDB2O43679 AC036111.3-201ENST00000526389 112 ntBASIC1.08□□□□□ -2.24
LDB2O43679 AC106800.4-201ENST00000614905 153 ntBASIC1.08□□□□□ -2.24
LDB2O43679 U2.22-201ENST00000636441 106 ntBASIC1.08□□□□□ -2.24
LDB2O43679 AC008163.1-202ENST00000636004 2889 ntBASIC1.08□□□□□ -2.24
LDB2O43679 MTND5P18-201ENST00000445624 1801 ntBASIC1.08□□□□□ -2.24
LDB2O43679 Y_RNA.261-201ENST00000364631 102 ntBASIC1.07□□□□□ -2.24
LDB2O43679 RNU6-342P-201ENST00000384521 104 ntBASIC1.07□□□□□ -2.24
LDB2O43679 Y_RNA.563-201ENST00000384707 108 ntBASIC1.07□□□□□ -2.24
LDB2O43679 RNU6-1104P-201ENST00000384723 104 ntBASIC1.07□□□□□ -2.24
LDB2O43679 MIR518E-201ENST00000385252 88 ntBASIC1.07□□□□□ -2.24
LDB2O43679 MIR759-201ENST00000390224 91 ntBASIC1.07□□□□□ -2.24
LDB2O43679 SNORD111-201ENST00000408139 94 ntBASIC1.07□□□□□ -2.24
LDB2O43679 RNU6-1165P-201ENST00000410119 107 ntBASIC1.07□□□□□ -2.24
LDB2O43679 RNU4-69P-201ENST00000410677 143 ntBASIC1.07□□□□□ -2.24
LDB2O43679 RNU2-51P-201ENST00000410708 197 ntBASIC1.07□□□□□ -2.24
LDB2O43679 AC063976.4-201ENST00000421971 163 ntBASIC1.07□□□□□ -2.24
LDB2O43679 RNU6-313P-201ENST00000516317 112 ntBASIC1.07□□□□□ -2.24
LDB2O43679 MIR3163-201ENST00000581592 73 ntBASIC1.07□□□□□ -2.24
LDB2O43679 MIR548AE2-201ENST00000583456 67 ntBASIC1.07□□□□□ -2.24
LDB2O43679 AL078603.1-201ENST00000603824 313 ntBASIC1.07□□□□□ -2.24
LDB2O43679 AL662814.1-201ENST00000617364 121 ntBASIC1.07□□□□□ -2.24
LDB2O43679 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.07□□□□□ -2.24
LDB2O43679 RNU6-1154P-201ENST00000391001 104 ntBASIC1.06□□□□□ -2.24
LDB2O43679 RNU6-1086P-201ENST00000410930 100 ntBASIC1.06□□□□□ -2.24
LDB2O43679 AC002429.1-201ENST00000437672 148 ntBASIC1.06□□□□□ -2.24
LDB2O43679 RNU7-40P-201ENST00000516397 64 ntBASIC1.06□□□□□ -2.24
LDB2O43679 AC023827.1-201ENST00000569247 97 ntBASIC1.06□□□□□ -2.24
LDB2O43679 SNORD114-21-201ENST00000606412 72 ntBASIC1.06□□□□□ -2.24
LDB2O43679 AC012676.2-201ENST00000619258 186 ntBASIC1.06□□□□□ -2.24
LDB2O43679 RNA5SP205-201ENST00000364653 136 ntBASIC1.05□□□□□ -2.24
LDB2O43679 SNORA32-201ENST00000384072 121 ntBASIC1.05□□□□□ -2.24
LDB2O43679 RNU6-1237P-201ENST00000384777 107 ntBASIC1.05□□□□□ -2.24
LDB2O43679 MIR19B1-201ENST00000384829 87 ntBASIC1.05□□□□□ -2.24
LDB2O43679 MT-TF-201ENST00000387314 71 ntBASIC1.05□□□□□ -2.24
LDB2O43679 RPS29P28-201ENST00000446439 141 ntBASIC1.05□□□□□ -2.24
LDB2O43679 RNU7-35P-201ENST00000517174 62 ntBASIC1.05□□□□□ -2.24
LDB2O43679 AC141846.1-201ENST00000568348 142 ntBASIC1.05□□□□□ -2.24
LDB2O43679 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
LDB2O43679 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
LDB2O43679 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
LDB2O43679 RNU6-1081P-201ENST00000384537 107 ntBASIC1.04□□□□□ -2.24
LDB2O43679 SNORA22C-201ENST00000384614 134 ntBASIC1.04□□□□□ -2.24
LDB2O43679 MT-TI-201ENST00000387365 69 ntBASIC1.04□□□□□ -2.24
LDB2O43679 SNORD77B-201ENST00000391112 67 ntBASIC1.04□□□□□ -2.24
LDB2O43679 MIR18B-201ENST00000454574 71 ntBASIC1.04□□□□□ -2.24
LDB2O43679 MIR6734-201ENST00000621166 68 ntBASIC1.04□□□□□ -2.24
LDB2O43679 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.03□□□□□ -2.24
LDB2O43679 MIR30D-201ENST00000362283 70 ntBASIC1.03□□□□□ -2.24
LDB2O43679 Y_RNA.353-201ENST00000365440 108 ntBASIC1.03□□□□□ -2.24
LDB2O43679 SNORD33.1-201ENST00000516213 88 ntBASIC1.03□□□□□ -2.24
LDB2O43679 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.03□□□□□ -2.24
LDB2O43679 uc_338.6-201ENST00000613544 171 ntBASIC1.03□□□□□ -2.24
LDB2O43679 MIR7111-201ENST00000619751 72 ntBASIC1.03□□□□□ -2.24
LDB2O43679 MIR548I2-201ENST00000408348 149 ntBASIC1.02□□□□□ -2.25
LDB2O43679 RNU6-994P-201ENST00000410507 111 ntBASIC1.02□□□□□ -2.25
LDB2O43679 MIR1270-201ENST00000459320 83 ntBASIC1.02□□□□□ -2.25
LDB2O43679 RNU7-79P-201ENST00000516082 62 ntBASIC1.02□□□□□ -2.25
LDB2O43679 RNU7-6P-201ENST00000516845 62 ntBASIC1.02□□□□□ -2.25
LDB2O43679 SNORA4-201ENST00000584302 138 ntBASIC1.02□□□□□ -2.25
LDB2O43679 AL359881.1-201ENST00000602916 267 ntBASIC1.02□□□□□ -2.25
LDB2O43679 RNU6-94P-201ENST00000607728 107 ntBASIC1.02□□□□□ -2.25
LDB2O43679 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
LDB2O43679 RNY4P6-201ENST00000363667 96 ntBASIC1.01□□□□□ -2.25
LDB2O43679 RNU1-124P-201ENST00000363861 145 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 202.7 ms