Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 MIRLET7F2-201ENST00000385277 83 ntBASIC1.21□□□□□ -2.22
PHGDHO43175 RNA5SP237-201ENST00000410414 113 ntBASIC1.21□□□□□ -2.22
PHGDHO43175 RNU6-735P-201ENST00000410612 107 ntBASIC1.21□□□□□ -2.22
PHGDHO43175 MIR1270-201ENST00000459320 83 ntBASIC1.21□□□□□ -2.22
PHGDHO43175 MIR548AE2-201ENST00000583456 67 ntBASIC1.21□□□□□ -2.22
PHGDHO43175 MTND5P18-201ENST00000445624 1801 ntBASIC1.2□□□□□ -2.22
PHGDHO43175 SNORD113-1-201ENST00000365321 69 ntBASIC1.2□□□□□ -2.22
PHGDHO43175 RNU6-1117P-201ENST00000384525 104 ntBASIC1.2□□□□□ -2.22
PHGDHO43175 MIR942-201ENST00000401111 86 ntBASIC1.2□□□□□ -2.22
PHGDHO43175 RNU6-1165P-201ENST00000410119 107 ntBASIC1.2□□□□□ -2.22
PHGDHO43175 AC015818.7-201ENST00000428754 109 ntBASIC1.2□□□□□ -2.22
PHGDHO43175 AL603825.1-201ENST00000438481 80 ntBASIC1.2□□□□□ -2.22
PHGDHO43175 AC087499.7-201ENST00000441958 109 ntBASIC1.2□□□□□ -2.22
PHGDHO43175 AC067940.1-201ENST00000458411 300 ntBASIC1.2□□□□□ -2.22
PHGDHO43175 AC108729.3-201ENST00000513484 108 ntBASIC1.2□□□□□ -2.22
PHGDHO43175 RPS29P28-201ENST00000446439 141 ntBASIC1.19□□□□□ -2.22
PHGDHO43175 Y_RNA.712-201ENST00000517011 92 ntBASIC1.19□□□□□ -2.22
PHGDHO43175 MIR4498-201ENST00000577599 66 ntBASIC1.19□□□□□ -2.22
PHGDHO43175 SNORD114-24-201ENST00000365029 72 ntBASIC1.18□□□□□ -2.22
PHGDHO43175 Y_RNA.338-201ENST00000365320 114 ntBASIC1.18□□□□□ -2.22
PHGDHO43175 SNORA22C-201ENST00000384614 134 ntBASIC1.18□□□□□ -2.22
PHGDHO43175 MIR563-201ENST00000385080 79 ntBASIC1.18□□□□□ -2.22
PHGDHO43175 RNA5SP136-201ENST00000410906 107 ntBASIC1.18□□□□□ -2.22
PHGDHO43175 SNORD83.1-201ENST00000411362 77 ntBASIC1.18□□□□□ -2.22
PHGDHO43175 FABP5P4-201ENST00000437203 171 ntBASIC1.18□□□□□ -2.22
PHGDHO43175 RPS23P4-201ENST00000487908 423 ntBASIC1.18□□□□□ -2.22
PHGDHO43175 AL157834.3-201ENST00000615543 103 ntBASIC1.18□□□□□ -2.22
PHGDHO43175 MIR3914-2-201ENST00000637339 95 ntBASIC1.18□□□□□ -2.22
PHGDHO43175 MIR30D-201ENST00000362283 70 ntBASIC1.17□□□□□ -2.22
PHGDHO43175 RNU6-934P-201ENST00000365154 107 ntBASIC1.17□□□□□ -2.22
PHGDHO43175 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.17□□□□□ -2.22
PHGDHO43175 RNU7-79P-201ENST00000516082 62 ntBASIC1.17□□□□□ -2.22
PHGDHO43175 AL662814.1-201ENST00000617364 121 ntBASIC1.17□□□□□ -2.22
PHGDHO43175 AL353770.2-201ENST00000620024 78 ntBASIC1.17□□□□□ -2.22
PHGDHO43175 AL589743.1-201ENST00000551932 2712 ntBASIC1.17□□□□□ -2.22
PHGDHO43175 Y_RNA.198-201ENST00000364013 98 ntBASIC1.16□□□□□ -2.22
PHGDHO43175 RNU6-1168P-201ENST00000390831 104 ntBASIC1.16□□□□□ -2.22
PHGDHO43175 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.16□□□□□ -2.22
PHGDHO43175 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.16□□□□□ -2.22
PHGDHO43175 RNU4-69P-201ENST00000410677 143 ntBASIC1.16□□□□□ -2.22
PHGDHO43175 RNU6-1086P-201ENST00000410930 100 ntBASIC1.16□□□□□ -2.22
PHGDHO43175 AC008267.6-201ENST00000441664 139 ntBASIC1.16□□□□□ -2.22
PHGDHO43175 RNU7-6P-201ENST00000516845 62 ntBASIC1.16□□□□□ -2.22
PHGDHO43175 AC141846.1-201ENST00000568348 142 ntBASIC1.16□□□□□ -2.22
PHGDHO43175 MIR4771-2-201ENST00000577758 74 ntBASIC1.16□□□□□ -2.22
PHGDHO43175 MIR4771-1-201ENST00000582617 74 ntBASIC1.16□□□□□ -2.22
PHGDHO43175 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
PHGDHO43175 MT-TF-201ENST00000387314 71 ntBASIC1.15□□□□□ -2.23
PHGDHO43175 RNU6-1154P-201ENST00000391001 104 ntBASIC1.15□□□□□ -2.23
PHGDHO43175 MIR1285-1-201ENST00000408593 84 ntBASIC1.15□□□□□ -2.23
PHGDHO43175 RPL39P25-201ENST00000449384 154 ntBASIC1.15□□□□□ -2.23
PHGDHO43175 MIR18B-201ENST00000454574 71 ntBASIC1.15□□□□□ -2.23
PHGDHO43175 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.15□□□□□ -2.23
PHGDHO43175 COX6CP6-201ENST00000490840 228 ntBASIC1.15□□□□□ -2.23
PHGDHO43175 SNORD33.1-201ENST00000516213 88 ntBASIC1.15□□□□□ -2.23
PHGDHO43175 RNU6-62P-201ENST00000516526 102 ntBASIC1.15□□□□□ -2.23
PHGDHO43175 RNU7-35P-201ENST00000517174 62 ntBASIC1.15□□□□□ -2.23
PHGDHO43175 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.15□□□□□ -2.23
PHGDHO43175 MIR6078-201ENST00000611069 100 ntBASIC1.15□□□□□ -2.23
PHGDHO43175 AC087741.2-201ENST00000619415 172 ntBASIC1.15□□□□□ -2.23
PHGDHO43175 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.15□□□□□ -2.23
PHGDHO43175 MIR1-1-201ENST00000362147 71 ntBASIC1.14□□□□□ -2.23
PHGDHO43175 RNY1P13-201ENST00000365030 105 ntBASIC1.14□□□□□ -2.23
PHGDHO43175 MIR100-201ENST00000385259 80 ntBASIC1.14□□□□□ -2.23
PHGDHO43175 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.14□□□□□ -2.23
PHGDHO43175 AL359821.1-201ENST00000605519 182 ntBASIC1.14□□□□□ -2.23
PHGDHO43175 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
PHGDHO43175 Y_RNA.346-201ENST00000365385 112 ntBASIC1.13□□□□□ -2.23
PHGDHO43175 SNORD89-201ENST00000390981 114 ntBASIC1.13□□□□□ -2.23
PHGDHO43175 RPS26P5-201ENST00000418544 335 ntBASIC1.13□□□□□ -2.23
PHGDHO43175 PDCD5P2-201ENST00000507570 312 ntBASIC1.13□□□□□ -2.23
PHGDHO43175 RNU6-1053P-201ENST00000515930 101 ntBASIC1.13□□□□□ -2.23
PHGDHO43175 SNORA4-201ENST00000584302 138 ntBASIC1.13□□□□□ -2.23
PHGDHO43175 AL359881.1-201ENST00000602916 267 ntBASIC1.13□□□□□ -2.23
PHGDHO43175 AC023934.1-201ENST00000574529 2389 ntBASIC1.13□□□□□ -2.23
PHGDHO43175 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.13□□□□□ -2.23
PHGDHO43175 Y_RNA.213-201ENST00000364178 111 ntBASIC1.12□□□□□ -2.23
PHGDHO43175 RNA5SP205-201ENST00000364653 136 ntBASIC1.12□□□□□ -2.23
PHGDHO43175 Y_RNA.353-201ENST00000365440 108 ntBASIC1.12□□□□□ -2.23
PHGDHO43175 MIR548A1-201ENST00000385041 97 ntBASIC1.12□□□□□ -2.23
PHGDHO43175 U8.15-201ENST00000390947 134 ntBASIC1.12□□□□□ -2.23
PHGDHO43175 MIR1827-201ENST00000408549 66 ntBASIC1.12□□□□□ -2.23
PHGDHO43175 Y_RNA.649-201ENST00000459077 103 ntBASIC1.12□□□□□ -2.23
PHGDHO43175 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.12□□□□□ -2.23
PHGDHO43175 RNU6-479P-201ENST00000516348 105 ntBASIC1.12□□□□□ -2.23
PHGDHO43175 SNORD67.1-201ENST00000516618 108 ntBASIC1.12□□□□□ -2.23
PHGDHO43175 AC020891.4-201ENST00000605745 93 ntBASIC1.12□□□□□ -2.23
PHGDHO43175 Y_RNA.773-201ENST00000607168 90 ntBASIC1.12□□□□□ -2.23
PHGDHO43175 AL136317.1-201ENST00000612653 226 ntBASIC1.12□□□□□ -2.23
PHGDHO43175 RNU6-369P-201ENST00000362515 102 ntBASIC1.11□□□□□ -2.23
PHGDHO43175 Y_RNA.299-201ENST00000364973 94 ntBASIC1.11□□□□□ -2.23
PHGDHO43175 Y_RNA.327-201ENST00000365201 102 ntBASIC1.11□□□□□ -2.23
PHGDHO43175 RNU6-616P-201ENST00000384353 107 ntBASIC1.11□□□□□ -2.23
PHGDHO43175 RNU6-313P-201ENST00000516317 112 ntBASIC1.11□□□□□ -2.23
PHGDHO43175 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.11□□□□□ -2.23
PHGDHO43175 AC105081.1-201ENST00000617727 106 ntBASIC1.11□□□□□ -2.23
PHGDHO43175 MIR337-201ENST00000362281 93 ntBASIC1.1□□□□□ -2.23
PHGDHO43175 RNY1P10-201ENST00000363268 113 ntBASIC1.1□□□□□ -2.23
PHGDHO43175 Y_RNA.563-201ENST00000384707 108 ntBASIC1.1□□□□□ -2.23
PHGDHO43175 MIR759-201ENST00000390224 91 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 198 ms