Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 Y_RNA.239-201ENST00000364444 113 ntBASIC-2.16□□□□□ -2.76
HMGN4O00479 RNY3P4-201ENST00000384428 101 ntBASIC-2.16□□□□□ -2.76
HMGN4O00479 MIRLET7B-201ENST00000385140 83 ntBASIC-2.16□□□□□ -2.76
HMGN4O00479 RNU6-1321P-201ENST00000390905 107 ntBASIC-2.16□□□□□ -2.76
HMGN4O00479 RNU7-113P-201ENST00000459273 62 ntBASIC-2.16□□□□□ -2.76
HMGN4O00479 MTCO2P24-201ENST00000515611 426 ntBASIC-2.16□□□□□ -2.76
HMGN4O00479 AC006504.6-201ENST00000590142 199 ntBASIC-2.16□□□□□ -2.76
HMGN4O00479 U4.2-201ENST00000618561 85 ntBASIC-2.16□□□□□ -2.76
HMGN4O00479 Y_RNA.331-201ENST00000365267 102 ntBASIC-2.17□□□□□ -2.76
HMGN4O00479 Y_RNA.353-201ENST00000365440 108 ntBASIC-2.17□□□□□ -2.76
HMGN4O00479 RPS29P25-201ENST00000481709 171 ntBASIC-2.17□□□□□ -2.76
HMGN4O00479 RNU7-70P-201ENST00000516941 66 ntBASIC-2.17□□□□□ -2.76
HMGN4O00479 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-2.17□□□□□ -2.76
HMGN4O00479 RNY4P6-201ENST00000363667 96 ntBASIC-2.18□□□□□ -2.76
HMGN4O00479 RNU6-1163P-201ENST00000364516 107 ntBASIC-2.18□□□□□ -2.76
HMGN4O00479 Y_RNA.560-201ENST00000384689 102 ntBASIC-2.18□□□□□ -2.76
HMGN4O00479 MIR216B-201ENST00000390186 82 ntBASIC-2.18□□□□□ -2.76
HMGN4O00479 RNU6-1246P-201ENST00000391064 107 ntBASIC-2.18□□□□□ -2.76
HMGN4O00479 Y_RNA.618-201ENST00000410949 107 ntBASIC-2.18□□□□□ -2.76
HMGN4O00479 MTND2P14-201ENST00000482139 351 ntBASIC-2.18□□□□□ -2.76
HMGN4O00479 Y_RNA.674-201ENST00000516362 113 ntBASIC-2.18□□□□□ -2.76
HMGN4O00479 RNU6-835P-201ENST00000516974 104 ntBASIC-2.18□□□□□ -2.76
HMGN4O00479 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-2.18□□□□□ -2.76
HMGN4O00479 MIR1244-1-201ENST00000612829 85 ntBASIC-2.18□□□□□ -2.76
HMGN4O00479 MIR548O2-201ENST00000616090 70 ntBASIC-2.18□□□□□ -2.76
HMGN4O00479 AC092794.2-201ENST00000620933 563 ntBASIC-2.18□□□□□ -2.76
HMGN4O00479 MIR1244-3-201ENST00000635744 85 ntBASIC-2.18□□□□□ -2.76
HMGN4O00479 MIR1244-2-201ENST00000636449 85 ntBASIC-2.18□□□□□ -2.76
HMGN4O00479 MIR1244-4-202ENST00000636813 85 ntBASIC-2.18□□□□□ -2.76
HMGN4O00479 SNORD18.1-201ENST00000363807 70 ntBASIC-2.19□□□□□ -2.76
HMGN4O00479 SNORD114-3-201ENST00000364969 75 ntBASIC-2.19□□□□□ -2.76
HMGN4O00479 RNA5SP86-201ENST00000390869 98 ntBASIC-2.19□□□□□ -2.76
HMGN4O00479 RNU7-48P-201ENST00000458875 63 ntBASIC-2.19□□□□□ -2.76
HMGN4O00479 MIR2053-201ENST00000459295 91 ntBASIC-2.19□□□□□ -2.76
HMGN4O00479 AC068339.1-201ENST00000526965 141 ntBASIC-2.19□□□□□ -2.76
HMGN4O00479 MIR4659A-201ENST00000580269 81 ntBASIC-2.19□□□□□ -2.76
HMGN4O00479 MIR367-201ENST00000362299 68 ntBASIC-2.2□□□□□ -2.76
HMGN4O00479 Y_RNA.77-201ENST00000362962 107 ntBASIC-2.2□□□□□ -2.76
HMGN4O00479 Y_RNA.98-201ENST00000363109 102 ntBASIC-2.2□□□□□ -2.76
HMGN4O00479 Y_RNA.105-201ENST00000363182 111 ntBASIC-2.2□□□□□ -2.76
HMGN4O00479 Y_RNA.207-201ENST00000364142 106 ntBASIC-2.2□□□□□ -2.76
HMGN4O00479 Y_RNA.288-201ENST00000364854 92 ntBASIC-2.2□□□□□ -2.76
HMGN4O00479 Y_RNA.426-201ENST00000384068 113 ntBASIC-2.2□□□□□ -2.76
HMGN4O00479 RNY3P10-201ENST00000384764 102 ntBASIC-2.2□□□□□ -2.76
HMGN4O00479 Y_RNA.615-201ENST00000410769 117 ntBASIC-2.2□□□□□ -2.76
HMGN4O00479 RNU6-412P-201ENST00000516434 106 ntBASIC-2.2□□□□□ -2.76
HMGN4O00479 Y_RNA.91-201ENST00000363042 107 ntBASIC-2.21□□□□□ -2.76
HMGN4O00479 SNORD114-4-201ENST00000363962 75 ntBASIC-2.21□□□□□ -2.76
HMGN4O00479 Y_RNA.542-201ENST00000384641 111 ntBASIC-2.21□□□□□ -2.76
HMGN4O00479 RNU6-1248P-201ENST00000391096 64 ntBASIC-2.21□□□□□ -2.76
HMGN4O00479 RNU6-337P-201ENST00000391243 106 ntBASIC-2.21□□□□□ -2.76
HMGN4O00479 AL606845.1-201ENST00000404881 255 ntBASIC-2.21□□□□□ -2.76
HMGN4O00479 Y_RNA.596-201ENST00000410462 109 ntBASIC-2.21□□□□□ -2.76
HMGN4O00479 RNA5SP144-201ENST00000410846 116 ntBASIC-2.21□□□□□ -2.76
HMGN4O00479 Y_RNA.644-201ENST00000459006 113 ntBASIC-2.21□□□□□ -2.76
HMGN4O00479 MIR4724-201ENST00000579485 89 ntBASIC-2.21□□□□□ -2.76
HMGN4O00479 AC133104.2-201ENST00000615272 193 ntBASIC-2.21□□□□□ -2.76
HMGN4O00479 MIR6128-201ENST00000615528 109 ntBASIC-2.21□□□□□ -2.76
HMGN4O00479 Y_RNA.247-201ENST00000364500 92 ntBASIC-2.22□□□□□ -2.76
HMGN4O00479 Y_RNA.414-201ENST00000384011 101 ntBASIC-2.22□□□□□ -2.76
HMGN4O00479 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-2.22□□□□□ -2.76
HMGN4O00479 Y_RNA.592-201ENST00000410274 109 ntBASIC-2.22□□□□□ -2.76
HMGN4O00479 Y_RNA.653-201ENST00000459091 95 ntBASIC-2.22□□□□□ -2.76
HMGN4O00479 MRPS36P3-201ENST00000519284 130 ntBASIC-2.22□□□□□ -2.76
HMGN4O00479 MIR548AE2-201ENST00000583456 67 ntBASIC-2.22□□□□□ -2.76
HMGN4O00479 AP001362.1-201ENST00000625165 124 ntBASIC-2.22□□□□□ -2.76
HMGN4O00479 Y_RNA.120-201ENST00000363304 110 ntBASIC-2.23□□□□□ -2.77
HMGN4O00479 Y_RNA.169-201ENST00000363745 96 ntBASIC-2.23□□□□□ -2.77
HMGN4O00479 Y_RNA.342-201ENST00000365352 113 ntBASIC-2.23□□□□□ -2.77
HMGN4O00479 RNY3-201ENST00000365484 102 ntBASIC-2.23□□□□□ -2.77
HMGN4O00479 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.23□□□□□ -2.77
HMGN4O00479 SNORA69.1-201ENST00000390904 137 ntBASIC-2.23□□□□□ -2.77
HMGN4O00479 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-2.23□□□□□ -2.77
HMGN4O00479 MIR548H1-201ENST00000408610 102 ntBASIC-2.23□□□□□ -2.77
HMGN4O00479 AL009048.1-201ENST00000450437 298 ntBASIC-2.23□□□□□ -2.77
HMGN4O00479 RNU6-759P-201ENST00000516740 103 ntBASIC-2.23□□□□□ -2.77
HMGN4O00479 Y_RNA.711-201ENST00000516993 102 ntBASIC-2.23□□□□□ -2.77
HMGN4O00479 MTND3P12-201ENST00000559068 328 ntBASIC-2.23□□□□□ -2.77
HMGN4O00479 MIR3942-201ENST00000585264 109 ntBASIC-2.23□□□□□ -2.77
HMGN4O00479 AC084781.2-201ENST00000615568 161 ntBASIC-2.23□□□□□ -2.77
HMGN4O00479 AC068137.3-201ENST00000639191 341 ntBASIC-2.23□□□□□ -2.77
HMGN4O00479 RNU6-208P-201ENST00000362431 107 ntBASIC-2.24□□□□□ -2.77
HMGN4O00479 SNORA2.1-201ENST00000363089 137 ntBASIC-2.24□□□□□ -2.77
HMGN4O00479 Y_RNA.127-201ENST00000363386 109 ntBASIC-2.24□□□□□ -2.77
HMGN4O00479 Y_RNA.383-201ENST00000383855 97 ntBASIC-2.24□□□□□ -2.77
HMGN4O00479 RNU6-746P-201ENST00000384112 109 ntBASIC-2.24□□□□□ -2.77
HMGN4O00479 MIR122-201ENST00000385044 85 ntBASIC-2.24□□□□□ -2.77
HMGN4O00479 RNU6-1299P-201ENST00000516316 100 ntBASIC-2.24□□□□□ -2.77
HMGN4O00479 RNA5SP153-201ENST00000516498 76 ntBASIC-2.24□□□□□ -2.77
HMGN4O00479 MIR3129-201ENST00000581095 76 ntBASIC-2.24□□□□□ -2.77
HMGN4O00479 AC097639.2-201ENST00000603159 172 ntBASIC-2.24□□□□□ -2.77
HMGN4O00479 AL627230.5-201ENST00000619807 58 ntBASIC-2.24□□□□□ -2.77
HMGN4O00479 TRDV1-202ENST00000621643 102 ntBASIC-2.24□□□□□ -2.77
HMGN4O00479 U6.100-201ENST00000636230 99 ntBASIC-2.24□□□□□ -2.77
HMGN4O00479 Y_RNA.2-201ENST00000362330 96 ntBASIC-2.25□□□□□ -2.77
HMGN4O00479 SNORD115-33-201ENST00000363723 82 ntBASIC-2.25□□□□□ -2.77
HMGN4O00479 Y_RNA.448-201ENST00000384185 108 ntBASIC-2.25□□□□□ -2.77
HMGN4O00479 MIR516A2-201ENST00000384888 90 ntBASIC-2.25□□□□□ -2.77
HMGN4O00479 MIR516A1-201ENST00000385033 90 ntBASIC-2.25□□□□□ -2.77
HMGN4O00479 RNU6-732P-201ENST00000516033 103 ntBASIC-2.25□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms