Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 RNU7-21P-201ENST00000459430 62 ntBASIC1.57□□□□□ -2.16
CCDC163A0A0D9SF12 SNORD79.1-201ENST00000516069 84 ntBASIC1.57□□□□□ -2.16
CCDC163A0A0D9SF12 Y_RNA.712-201ENST00000517011 92 ntBASIC1.57□□□□□ -2.16
CCDC163A0A0D9SF12 SNORA4-201ENST00000584302 138 ntBASIC1.57□□□□□ -2.16
CCDC163A0A0D9SF12 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.57□□□□□ -2.16
CCDC163A0A0D9SF12 MIR548A3-201ENST00000385297 97 ntBASIC1.56□□□□□ -2.16
CCDC163A0A0D9SF12 RNU6-955P-201ENST00000410497 104 ntBASIC1.56□□□□□ -2.16
CCDC163A0A0D9SF12 RNU4-69P-201ENST00000410677 143 ntBASIC1.56□□□□□ -2.16
CCDC163A0A0D9SF12 RNU6-1086P-201ENST00000410930 100 ntBASIC1.56□□□□□ -2.16
CCDC163A0A0D9SF12 RPL39P25-201ENST00000449384 154 ntBASIC1.56□□□□□ -2.16
CCDC163A0A0D9SF12 snoU13.2-201ENST00000459201 104 ntBASIC1.56□□□□□ -2.16
CCDC163A0A0D9SF12 RNU7-90P-201ENST00000459216 62 ntBASIC1.56□□□□□ -2.16
CCDC163A0A0D9SF12 MIR6740-201ENST00000618268 113 ntBASIC1.56□□□□□ -2.16
CCDC163A0A0D9SF12 SNORD113.3-201ENST00000364630 78 ntBASIC1.55□□□□□ -2.16
CCDC163A0A0D9SF12 Y_RNA.299-201ENST00000364973 94 ntBASIC1.55□□□□□ -2.16
CCDC163A0A0D9SF12 MT-TI-201ENST00000387365 69 ntBASIC1.55□□□□□ -2.16
CCDC163A0A0D9SF12 MT-TN-201ENST00000387400 73 ntBASIC1.55□□□□□ -2.16
CCDC163A0A0D9SF12 Y_RNA.649-201ENST00000459077 103 ntBASIC1.55□□□□□ -2.16
CCDC163A0A0D9SF12 SNORD33.1-201ENST00000516213 88 ntBASIC1.55□□□□□ -2.16
CCDC163A0A0D9SF12 U6.95-201ENST00000636931 70 ntBASIC1.55□□□□□ -2.16
CCDC163A0A0D9SF12 SNORD115-2-201ENST00000362842 82 ntBASIC1.54□□□□□ -2.16
CCDC163A0A0D9SF12 Y_RNA.191-201ENST00000363972 113 ntBASIC1.54□□□□□ -2.16
CCDC163A0A0D9SF12 SNORD115-20-201ENST00000365099 82 ntBASIC1.54□□□□□ -2.16
CCDC163A0A0D9SF12 MIRLET7F2-201ENST00000385277 83 ntBASIC1.54□□□□□ -2.16
CCDC163A0A0D9SF12 RPS23P4-201ENST00000487908 423 ntBASIC1.54□□□□□ -2.16
CCDC163A0A0D9SF12 AC036111.3-201ENST00000526389 112 ntBASIC1.54□□□□□ -2.16
CCDC163A0A0D9SF12 MIR3163-201ENST00000581592 73 ntBASIC1.54□□□□□ -2.16
CCDC163A0A0D9SF12 RNA5SP205-201ENST00000364653 136 ntBASIC1.53□□□□□ -2.16
CCDC163A0A0D9SF12 SNORD77B-201ENST00000391112 67 ntBASIC1.53□□□□□ -2.16
CCDC163A0A0D9SF12 RNU6-1165P-201ENST00000410119 107 ntBASIC1.53□□□□□ -2.16
CCDC163A0A0D9SF12 RNU6-994P-201ENST00000410507 111 ntBASIC1.53□□□□□ -2.16
CCDC163A0A0D9SF12 RNU6-735P-201ENST00000410612 107 ntBASIC1.53□□□□□ -2.16
CCDC163A0A0D9SF12 RNU7-79P-201ENST00000516082 62 ntBASIC1.53□□□□□ -2.16
CCDC163A0A0D9SF12 RNU7-40P-201ENST00000516397 64 ntBASIC1.53□□□□□ -2.16
CCDC163A0A0D9SF12 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
CCDC163A0A0D9SF12 AL589743.1-201ENST00000551932 2712 ntBASIC1.52□□□□□ -2.17
CCDC163A0A0D9SF12 RNU6-939P-201ENST00000384634 107 ntBASIC1.52□□□□□ -2.17
CCDC163A0A0D9SF12 MIR548I2-201ENST00000408348 149 ntBASIC1.52□□□□□ -2.17
CCDC163A0A0D9SF12 RNU1-92P-201ENST00000517017 135 ntBASIC1.52□□□□□ -2.17
CCDC163A0A0D9SF12 MIR4452-201ENST00000583004 71 ntBASIC1.52□□□□□ -2.17
CCDC163A0A0D9SF12 AL670379.3-201ENST00000605040 251 ntBASIC1.52□□□□□ -2.17
CCDC163A0A0D9SF12 AL157834.3-201ENST00000615543 103 ntBASIC1.52□□□□□ -2.17
CCDC163A0A0D9SF12 AL353770.2-201ENST00000620024 78 ntBASIC1.52□□□□□ -2.17
CCDC163A0A0D9SF12 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
CCDC163A0A0D9SF12 Y_RNA.168-201ENST00000363740 102 ntBASIC1.51□□□□□ -2.17
CCDC163A0A0D9SF12 SNORD48-201ENST00000364953 64 ntBASIC1.51□□□□□ -2.17
CCDC163A0A0D9SF12 MIR150-201ENST00000385048 84 ntBASIC1.51□□□□□ -2.17
CCDC163A0A0D9SF12 SNORD111-201ENST00000408139 94 ntBASIC1.51□□□□□ -2.17
CCDC163A0A0D9SF12 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.51□□□□□ -2.17
CCDC163A0A0D9SF12 SNORD83.1-201ENST00000411362 77 ntBASIC1.51□□□□□ -2.17
CCDC163A0A0D9SF12 AC002429.1-201ENST00000437672 148 ntBASIC1.51□□□□□ -2.17
CCDC163A0A0D9SF12 snoU13.21-201ENST00000459368 105 ntBASIC1.51□□□□□ -2.17
CCDC163A0A0D9SF12 RNA5SP102-201ENST00000516865 106 ntBASIC1.51□□□□□ -2.17
CCDC163A0A0D9SF12 RNU6-94P-201ENST00000607728 107 ntBASIC1.51□□□□□ -2.17
CCDC163A0A0D9SF12 uc_338.6-201ENST00000613544 171 ntBASIC1.51□□□□□ -2.17
CCDC163A0A0D9SF12 AL662814.1-201ENST00000617364 121 ntBASIC1.51□□□□□ -2.17
CCDC163A0A0D9SF12 RNY4P6-201ENST00000363667 96 ntBASIC1.5□□□□□ -2.17
CCDC163A0A0D9SF12 RNA5SP363-201ENST00000365072 115 ntBASIC1.5□□□□□ -2.17
CCDC163A0A0D9SF12 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
CCDC163A0A0D9SF12 AC063976.4-201ENST00000421971 163 ntBASIC1.5□□□□□ -2.17
CCDC163A0A0D9SF12 AC141846.1-201ENST00000568348 142 ntBASIC1.5□□□□□ -2.17
CCDC163A0A0D9SF12 AC106800.4-201ENST00000614905 153 ntBASIC1.5□□□□□ -2.17
CCDC163A0A0D9SF12 AC012676.2-201ENST00000619258 186 ntBASIC1.5□□□□□ -2.17
CCDC163A0A0D9SF12 MIR377-201ENST00000362145 69 ntBASIC1.49□□□□□ -2.17
CCDC163A0A0D9SF12 Y_RNA.291-201ENST00000364886 113 ntBASIC1.49□□□□□ -2.17
CCDC163A0A0D9SF12 RNU6-934P-201ENST00000365154 107 ntBASIC1.49□□□□□ -2.17
CCDC163A0A0D9SF12 MIR618-201ENST00000385287 98 ntBASIC1.49□□□□□ -2.17
CCDC163A0A0D9SF12 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
CCDC163A0A0D9SF12 RNU6-1290P-201ENST00000362957 109 ntBASIC1.48□□□□□ -2.17
CCDC163A0A0D9SF12 RNU6-42P-201ENST00000384165 107 ntBASIC1.48□□□□□ -2.17
CCDC163A0A0D9SF12 MIR1323-201ENST00000408090 73 ntBASIC1.48□□□□□ -2.17
CCDC163A0A0D9SF12 AC015818.7-201ENST00000428754 109 ntBASIC1.48□□□□□ -2.17
CCDC163A0A0D9SF12 AC087499.7-201ENST00000441958 109 ntBASIC1.48□□□□□ -2.17
CCDC163A0A0D9SF12 RNU7-35P-201ENST00000517174 62 ntBASIC1.48□□□□□ -2.17
CCDC163A0A0D9SF12 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
CCDC163A0A0D9SF12 RNU6-580P-201ENST00000365159 107 ntBASIC1.47□□□□□ -2.17
CCDC163A0A0D9SF12 Y_RNA.353-201ENST00000365440 108 ntBASIC1.47□□□□□ -2.17
CCDC163A0A0D9SF12 SNORD12-201ENST00000391002 90 ntBASIC1.47□□□□□ -2.17
CCDC163A0A0D9SF12 AC007012.1-201ENST00000567192 175 ntBASIC1.47□□□□□ -2.17
CCDC163A0A0D9SF12 AC105081.1-201ENST00000617727 106 ntBASIC1.47□□□□□ -2.17
CCDC163A0A0D9SF12 AL391516.1-201ENST00000554380 2449 ntBASIC1.47□□□□□ -2.17
CCDC163A0A0D9SF12 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CCDC163A0A0D9SF12 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.46□□□□□ -2.18
CCDC163A0A0D9SF12 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CCDC163A0A0D9SF12 AC023934.1-201ENST00000574529 2389 ntBASIC1.46□□□□□ -2.18
CCDC163A0A0D9SF12 RNY1P13-201ENST00000365030 105 ntBASIC1.46□□□□□ -2.18
CCDC163A0A0D9SF12 RNU6-1056P-201ENST00000383996 107 ntBASIC1.46□□□□□ -2.18
CCDC163A0A0D9SF12 RNU6-616P-201ENST00000384353 107 ntBASIC1.46□□□□□ -2.18
CCDC163A0A0D9SF12 Y_RNA.563-201ENST00000384707 108 ntBASIC1.46□□□□□ -2.18
CCDC163A0A0D9SF12 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.46□□□□□ -2.18
CCDC163A0A0D9SF12 RNU6-1064P-201ENST00000410626 104 ntBASIC1.46□□□□□ -2.18
CCDC163A0A0D9SF12 RNA5SP220-201ENST00000516298 104 ntBASIC1.46□□□□□ -2.18
CCDC163A0A0D9SF12 SNORD67.1-201ENST00000516618 108 ntBASIC1.46□□□□□ -2.18
CCDC163A0A0D9SF12 MIR4771-2-201ENST00000577758 74 ntBASIC1.46□□□□□ -2.18
CCDC163A0A0D9SF12 MIR4771-1-201ENST00000582617 74 ntBASIC1.46□□□□□ -2.18
CCDC163A0A0D9SF12 FAM71BP1-201ENST00000604431 523 ntBASIC1.46□□□□□ -2.18
CCDC163A0A0D9SF12 MIR6078-201ENST00000611069 100 ntBASIC1.46□□□□□ -2.18
CCDC163A0A0D9SF12 AC087741.2-201ENST00000619415 172 ntBASIC1.46□□□□□ -2.18
CCDC163A0A0D9SF12 SNORA63.5-201ENST00000363548 123 ntBASIC1.45□□□□□ -2.18
CCDC163A0A0D9SF12 SNORD116-21-201ENST00000384507 92 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms