Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 SNORD115-44-201ENST00000365391 82 ntBASIC-0.87□□□□□ -2.55
TRAV1-1A0A0B4J248 RNU6-890P-201ENST00000384121 107 ntBASIC-0.87□□□□□ -2.55
TRAV1-1A0A0B4J248 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.87□□□□□ -2.55
TRAV1-1A0A0B4J248 Y_RNA.554-201ENST00000384672 102 ntBASIC-0.87□□□□□ -2.55
TRAV1-1A0A0B4J248 MIR526A2-201ENST00000390198 65 ntBASIC-0.87□□□□□ -2.55
TRAV1-1A0A0B4J248 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.87□□□□□ -2.55
TRAV1-1A0A0B4J248 AC099799.1-201ENST00000439809 192 ntBASIC-0.87□□□□□ -2.55
TRAV1-1A0A0B4J248 RNU7-195P-201ENST00000458793 62 ntBASIC-0.87□□□□□ -2.55
TRAV1-1A0A0B4J248 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.87□□□□□ -2.55
TRAV1-1A0A0B4J248 RNA5SP153-201ENST00000516498 76 ntBASIC-0.87□□□□□ -2.55
TRAV1-1A0A0B4J248 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.87□□□□□ -2.55
TRAV1-1A0A0B4J248 SNORD113-5-201ENST00000607261 78 ntBASIC-0.87□□□□□ -2.55
TRAV1-1A0A0B4J248 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.87□□□□□ -2.55
TRAV1-1A0A0B4J248 DLEU2_2.2-201ENST00000615474 90 ntBASIC-0.87□□□□□ -2.55
TRAV1-1A0A0B4J248 Y_RNA.51-201ENST00000362725 102 ntBASIC-0.88□□□□□ -2.55
TRAV1-1A0A0B4J248 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.88□□□□□ -2.55
TRAV1-1A0A0B4J248 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.88□□□□□ -2.55
TRAV1-1A0A0B4J248 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.88□□□□□ -2.55
TRAV1-1A0A0B4J248 RNU6-900P-201ENST00000384498 102 ntBASIC-0.88□□□□□ -2.55
TRAV1-1A0A0B4J248 RNU6-429P-201ENST00000384582 108 ntBASIC-0.88□□□□□ -2.55
TRAV1-1A0A0B4J248 SNORA53-201ENST00000391141 249 ntBASIC-0.88□□□□□ -2.55
TRAV1-1A0A0B4J248 AC098614.3-201ENST00000438957 440 ntBASIC-0.88□□□□□ -2.55
TRAV1-1A0A0B4J248 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.88□□□□□ -2.55
TRAV1-1A0A0B4J248 RNU6-893P-201ENST00000458841 100 ntBASIC-0.88□□□□□ -2.55
TRAV1-1A0A0B4J248 RNU7-10P-201ENST00000607194 63 ntBASIC-0.88□□□□□ -2.55
TRAV1-1A0A0B4J248 AC098479.1-201ENST00000609225 154 ntBASIC-0.88□□□□□ -2.55
TRAV1-1A0A0B4J248 AC145423.2-201ENST00000610631 239 ntBASIC-0.88□□□□□ -2.55
TRAV1-1A0A0B4J248 AL627230.5-201ENST00000619807 58 ntBASIC-0.88□□□□□ -2.55
TRAV1-1A0A0B4J248 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.89□□□□□ -2.55
TRAV1-1A0A0B4J248 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.89□□□□□ -2.55
TRAV1-1A0A0B4J248 MIR587-201ENST00000384845 96 ntBASIC-0.89□□□□□ -2.55
TRAV1-1A0A0B4J248 SNORA49-201ENST00000386157 136 ntBASIC-0.89□□□□□ -2.55
TRAV1-1A0A0B4J248 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.89□□□□□ -2.55
TRAV1-1A0A0B4J248 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.89□□□□□ -2.55
TRAV1-1A0A0B4J248 MTND1P29-201ENST00000448112 647 ntBASIC-0.89□□□□□ -2.55
TRAV1-1A0A0B4J248 AL500527.2-201ENST00000454105 95 ntBASIC-0.89□□□□□ -2.55
TRAV1-1A0A0B4J248 MTND4P17-201ENST00000470444 350 ntBASIC-0.89□□□□□ -2.55
TRAV1-1A0A0B4J248 SCARNA17-201ENST00000516183 144 ntBASIC-0.89□□□□□ -2.55
TRAV1-1A0A0B4J248 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.89□□□□□ -2.55
TRAV1-1A0A0B4J248 AC024909.2-201ENST00000553035 286 ntBASIC-0.89□□□□□ -2.55
TRAV1-1A0A0B4J248 MIR6738-201ENST00000619620 64 ntBASIC-0.89□□□□□ -2.55
TRAV1-1A0A0B4J248 RNU4-36P-201ENST00000364294 144 ntBASIC-0.9□□□□□ -2.55
TRAV1-1A0A0B4J248 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.9□□□□□ -2.55
TRAV1-1A0A0B4J248 RNU6-524P-201ENST00000384270 107 ntBASIC-0.9□□□□□ -2.55
TRAV1-1A0A0B4J248 MIR559-201ENST00000385188 96 ntBASIC-0.9□□□□□ -2.55
TRAV1-1A0A0B4J248 PMCHL1-202ENST00000423102 261 ntBASIC-0.9□□□□□ -2.55
TRAV1-1A0A0B4J248 RNU6-507P-201ENST00000516045 100 ntBASIC-0.9□□□□□ -2.55
TRAV1-1A0A0B4J248 AC040926.1-201ENST00000530195 238 ntBASIC-0.9□□□□□ -2.55
TRAV1-1A0A0B4J248 MIR4500-201ENST00000579472 76 ntBASIC-0.9□□□□□ -2.55
TRAV1-1A0A0B4J248 MIR5690-201ENST00000583739 73 ntBASIC-0.9□□□□□ -2.55
TRAV1-1A0A0B4J248 AC011603.4-201ENST00000611325 277 ntBASIC-0.9□□□□□ -2.55
TRAV1-1A0A0B4J248 MIR4272-201ENST00000635924 64 ntBASIC-0.9□□□□□ -2.55
TRAV1-1A0A0B4J248 MTND5P18-201ENST00000445624 1801 ntBASIC-0.9□□□□□ -2.55
TRAV1-1A0A0B4J248 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.91□□□□□ -2.56
TRAV1-1A0A0B4J248 RNU4-32P-201ENST00000363404 141 ntBASIC-0.91□□□□□ -2.56
TRAV1-1A0A0B4J248 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.91□□□□□ -2.56
TRAV1-1A0A0B4J248 RNU4-70P-201ENST00000384579 139 ntBASIC-0.91□□□□□ -2.56
TRAV1-1A0A0B4J248 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.91□□□□□ -2.56
TRAV1-1A0A0B4J248 SNORD83B-201ENST00000386745 93 ntBASIC-0.91□□□□□ -2.56
TRAV1-1A0A0B4J248 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.91□□□□□ -2.56
TRAV1-1A0A0B4J248 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.91□□□□□ -2.56
TRAV1-1A0A0B4J248 RNU7-74P-201ENST00000459104 62 ntBASIC-0.91□□□□□ -2.56
TRAV1-1A0A0B4J248 MIR1270-201ENST00000459320 83 ntBASIC-0.91□□□□□ -2.56
TRAV1-1A0A0B4J248 Y_RNA.688-201ENST00000516565 95 ntBASIC-0.91□□□□□ -2.56
TRAV1-1A0A0B4J248 Y_RNA.691-201ENST00000516611 103 ntBASIC-0.91□□□□□ -2.56
TRAV1-1A0A0B4J248 RNA5SP33-201ENST00000516687 98 ntBASIC-0.91□□□□□ -2.56
TRAV1-1A0A0B4J248 Y_RNA.713-201ENST00000517013 96 ntBASIC-0.91□□□□□ -2.56
TRAV1-1A0A0B4J248 MIR5704-201ENST00000584029 77 ntBASIC-0.91□□□□□ -2.56
TRAV1-1A0A0B4J248 MIR4324-201ENST00000584846 72 ntBASIC-0.91□□□□□ -2.56
TRAV1-1A0A0B4J248 AC007485.1-201ENST00000616755 206 ntBASIC-0.91□□□□□ -2.56
TRAV1-1A0A0B4J248 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.92□□□□□ -2.56
TRAV1-1A0A0B4J248 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.92□□□□□ -2.56
TRAV1-1A0A0B4J248 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.92□□□□□ -2.56
TRAV1-1A0A0B4J248 RNU6-10P-201ENST00000384036 107 ntBASIC-0.92□□□□□ -2.56
TRAV1-1A0A0B4J248 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.92□□□□□ -2.56
TRAV1-1A0A0B4J248 RNU6-102P-201ENST00000384485 104 ntBASIC-0.92□□□□□ -2.56
TRAV1-1A0A0B4J248 MT-TT-201ENST00000387460 66 ntBASIC-0.92□□□□□ -2.56
TRAV1-1A0A0B4J248 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.92□□□□□ -2.56
TRAV1-1A0A0B4J248 SNORD63B-201ENST00000411005 70 ntBASIC-0.92□□□□□ -2.56
TRAV1-1A0A0B4J248 SNRPGP8-201ENST00000454064 226 ntBASIC-0.92□□□□□ -2.56
TRAV1-1A0A0B4J248 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.92□□□□□ -2.56
TRAV1-1A0A0B4J248 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.92□□□□□ -2.56
TRAV1-1A0A0B4J248 AC245505.1-201ENST00000556398 224 ntBASIC-0.92□□□□□ -2.56
TRAV1-1A0A0B4J248 MIR4460-201ENST00000577862 86 ntBASIC-0.92□□□□□ -2.56
TRAV1-1A0A0B4J248 MIR3179-1-201ENST00000578940 84 ntBASIC-0.92□□□□□ -2.56
TRAV1-1A0A0B4J248 MIR3179-2-201ENST00000579107 84 ntBASIC-0.92□□□□□ -2.56
TRAV1-1A0A0B4J248 MIR3179-3-201ENST00000579566 84 ntBASIC-0.92□□□□□ -2.56
TRAV1-1A0A0B4J248 AC133104.2-201ENST00000615272 193 ntBASIC-0.92□□□□□ -2.56
TRAV1-1A0A0B4J248 MIR3179-4-201ENST00000617599 84 ntBASIC-0.92□□□□□ -2.56
TRAV1-1A0A0B4J248 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.93□□□□□ -2.56
TRAV1-1A0A0B4J248 SNORA51.5-201ENST00000384126 131 ntBASIC-0.93□□□□□ -2.56
TRAV1-1A0A0B4J248 MIR617-201ENST00000385030 97 ntBASIC-0.93□□□□□ -2.56
TRAV1-1A0A0B4J248 MIR517B-201ENST00000385102 67 ntBASIC-0.93□□□□□ -2.56
TRAV1-1A0A0B4J248 RNU6-370P-201ENST00000411008 104 ntBASIC-0.93□□□□□ -2.56
TRAV1-1A0A0B4J248 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.93□□□□□ -2.56
TRAV1-1A0A0B4J248 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-0.93□□□□□ -2.56
TRAV1-1A0A0B4J248 SPINT5P-201ENST00000448174 155 ntBASIC-0.93□□□□□ -2.56
TRAV1-1A0A0B4J248 RNU7-55P-201ENST00000459426 62 ntBASIC-0.93□□□□□ -2.56
TRAV1-1A0A0B4J248 U8.20-201ENST00000459445 131 ntBASIC-0.93□□□□□ -2.56
TRAV1-1A0A0B4J248 SNORD22.1-201ENST00000516331 125 ntBASIC-0.93□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms