Protein–RNA interactions for Protein: Q9Z2M6

Ubl3, Ubiquitin-like protein 3, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubl3Q9Z2M6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 Gm6345-202ENSMUST00000180900 204 ntBASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubl3Q9Z2M6 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubl3Q9Z2M6 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ubl3Q9Z2M6 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.27□□□□□ -0.12
Ubl3Q9Z2M6 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubl3Q9Z2M6 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ubl3Q9Z2M6 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ubl3Q9Z2M6 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubl3Q9Z2M6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubl3Q9Z2M6 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.27□□□□□ -0.12
Ubl3Q9Z2M6 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ubl3Q9Z2M6 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.27□□□□□ -0.12
Ubl3Q9Z2M6 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubl3Q9Z2M6 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubl3Q9Z2M6 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.27□□□□□ -0.12
Ubl3Q9Z2M6 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.27□□□□□ -0.13
Ubl3Q9Z2M6 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.27□□□□□ -0.13
Ubl3Q9Z2M6 Gm29518-201ENSMUST00000190858 372 ntBASIC14.27□□□□□ -0.13
Ubl3Q9Z2M6 Gm17808-201ENSMUST00000200859 894 ntBASIC14.27□□□□□ -0.13
Ubl3Q9Z2M6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubl3Q9Z2M6 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubl3Q9Z2M6 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubl3Q9Z2M6 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubl3Q9Z2M6 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ubl3Q9Z2M6 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubl3Q9Z2M6 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubl3Q9Z2M6 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Ubl3Q9Z2M6 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ubl3Q9Z2M6 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubl3Q9Z2M6 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubl3Q9Z2M6 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubl3Q9Z2M6 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Ubl3Q9Z2M6 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ubl3Q9Z2M6 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubl3Q9Z2M6 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubl3Q9Z2M6 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ubl3Q9Z2M6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubl3Q9Z2M6 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ubl3Q9Z2M6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.26□□□□□ -0.13
Ubl3Q9Z2M6 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.26□□□□□ -0.13
Ubl3Q9Z2M6 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Ubl3Q9Z2M6 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubl3Q9Z2M6 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Ubl3Q9Z2M6 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubl3Q9Z2M6 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ubl3Q9Z2M6 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubl3Q9Z2M6 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubl3Q9Z2M6 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubl3Q9Z2M6 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubl3Q9Z2M6 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ubl3Q9Z2M6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubl3Q9Z2M6 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
Ubl3Q9Z2M6 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubl3Q9Z2M6 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubl3Q9Z2M6 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Ubl3Q9Z2M6 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubl3Q9Z2M6 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubl3Q9Z2M6 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubl3Q9Z2M6 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubl3Q9Z2M6 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ubl3Q9Z2M6 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ubl3Q9Z2M6 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Ubl3Q9Z2M6 Gm45328-201ENSMUST00000210942 917 ntBASIC14.25□□□□□ -0.13
Ubl3Q9Z2M6 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubl3Q9Z2M6 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ubl3Q9Z2M6 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubl3Q9Z2M6 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubl3Q9Z2M6 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubl3Q9Z2M6 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubl3Q9Z2M6 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubl3Q9Z2M6 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Ubl3Q9Z2M6 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubl3Q9Z2M6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ubl3Q9Z2M6 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubl3Q9Z2M6 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubl3Q9Z2M6 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ubl3Q9Z2M6 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubl3Q9Z2M6 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubl3Q9Z2M6 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms