Protein–RNA interactions for Protein: Q9Z1P4

Lgr5, Leucine-rich repeat-containing G-protein coupled receptor 5, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgr5Q9Z1P4 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lgr5Q9Z1P4 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lgr5Q9Z1P4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lgr5Q9Z1P4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lgr5Q9Z1P4 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lgr5Q9Z1P4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lgr5Q9Z1P4 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Lgr5Q9Z1P4 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lgr5Q9Z1P4 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lgr5Q9Z1P4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lgr5Q9Z1P4 Gm12892-201ENSMUST00000117367 1146 ntBASIC19.06■□□□□ 0.64
Lgr5Q9Z1P4 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC19.06■□□□□ 0.64
Lgr5Q9Z1P4 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC19.06■□□□□ 0.64
Lgr5Q9Z1P4 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lgr5Q9Z1P4 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Lgr5Q9Z1P4 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lgr5Q9Z1P4 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lgr5Q9Z1P4 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lgr5Q9Z1P4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lgr5Q9Z1P4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lgr5Q9Z1P4 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lgr5Q9Z1P4 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lgr5Q9Z1P4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lgr5Q9Z1P4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC19.05■□□□□ 0.64
Lgr5Q9Z1P4 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Lgr5Q9Z1P4 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lgr5Q9Z1P4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lgr5Q9Z1P4 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lgr5Q9Z1P4 Gm13294-201ENSMUST00000121757 1330 ntBASIC19.05■□□□□ 0.64
Lgr5Q9Z1P4 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lgr5Q9Z1P4 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lgr5Q9Z1P4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Lgr5Q9Z1P4 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Lgr5Q9Z1P4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC19.05■□□□□ 0.64
Lgr5Q9Z1P4 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC19.05■□□□□ 0.64
Lgr5Q9Z1P4 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lgr5Q9Z1P4 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC19.05■□□□□ 0.64
Lgr5Q9Z1P4 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC19.05■□□□□ 0.64
Lgr5Q9Z1P4 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC19.05■□□□□ 0.64
Lgr5Q9Z1P4 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Lgr5Q9Z1P4 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Lgr5Q9Z1P4 AC151836.1-202ENSMUST00000226259 753 ntBASIC19.05■□□□□ 0.64
Lgr5Q9Z1P4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Lgr5Q9Z1P4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lgr5Q9Z1P4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Lgr5Q9Z1P4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Lgr5Q9Z1P4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lgr5Q9Z1P4 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.05■□□□□ 0.64
Lgr5Q9Z1P4 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lgr5Q9Z1P4 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lgr5Q9Z1P4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lgr5Q9Z1P4 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Lgr5Q9Z1P4 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lgr5Q9Z1P4 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lgr5Q9Z1P4 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC19.04■□□□□ 0.64
Lgr5Q9Z1P4 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC19.04■□□□□ 0.64
Lgr5Q9Z1P4 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Lgr5Q9Z1P4 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Lgr5Q9Z1P4 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC19.04■□□□□ 0.64
Lgr5Q9Z1P4 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
Lgr5Q9Z1P4 AC124549.3-201ENSMUST00000225541 367 ntBASIC19.04■□□□□ 0.64
Lgr5Q9Z1P4 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Lgr5Q9Z1P4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lgr5Q9Z1P4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lgr5Q9Z1P4 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Lgr5Q9Z1P4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Lgr5Q9Z1P4 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC19.04■□□□□ 0.64
Lgr5Q9Z1P4 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lgr5Q9Z1P4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lgr5Q9Z1P4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lgr5Q9Z1P4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Lgr5Q9Z1P4 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC19.03■□□□□ 0.64
Lgr5Q9Z1P4 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Lgr5Q9Z1P4 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Lgr5Q9Z1P4 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lgr5Q9Z1P4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lgr5Q9Z1P4 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC19.03■□□□□ 0.64
Lgr5Q9Z1P4 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lgr5Q9Z1P4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lgr5Q9Z1P4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lgr5Q9Z1P4 Gm5366-201ENSMUST00000215494 1338 ntBASIC19.02■□□□□ 0.64
Lgr5Q9Z1P4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lgr5Q9Z1P4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lgr5Q9Z1P4 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lgr5Q9Z1P4 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC19.02■□□□□ 0.64
Lgr5Q9Z1P4 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC19.02■□□□□ 0.64
Lgr5Q9Z1P4 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC19.02■□□□□ 0.64
Lgr5Q9Z1P4 AC158538.2-201ENSMUST00000225455 906 ntBASIC19.02■□□□□ 0.64
Lgr5Q9Z1P4 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lgr5Q9Z1P4 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lgr5Q9Z1P4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lgr5Q9Z1P4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lgr5Q9Z1P4 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Lgr5Q9Z1P4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Lgr5Q9Z1P4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lgr5Q9Z1P4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lgr5Q9Z1P4 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC19.01■□□□□ 0.63
Lgr5Q9Z1P4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Lgr5Q9Z1P4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lgr5Q9Z1P4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms