Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ClcnkaQ9WUB7 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ClcnkaQ9WUB7 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.77□□□□□ -0.05
ClcnkaQ9WUB7 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ClcnkaQ9WUB7 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ClcnkaQ9WUB7 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.76□□□□□ -0.05
ClcnkaQ9WUB7 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.75□□□□□ -0.05
ClcnkaQ9WUB7 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClcnkaQ9WUB7 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClcnkaQ9WUB7 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
ClcnkaQ9WUB7 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ClcnkaQ9WUB7 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClcnkaQ9WUB7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClcnkaQ9WUB7 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ClcnkaQ9WUB7 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClcnkaQ9WUB7 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClcnkaQ9WUB7 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClcnkaQ9WUB7 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClcnkaQ9WUB7 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ClcnkaQ9WUB7 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ClcnkaQ9WUB7 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClcnkaQ9WUB7 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClcnkaQ9WUB7 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
ClcnkaQ9WUB7 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClcnkaQ9WUB7 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClcnkaQ9WUB7 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClcnkaQ9WUB7 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClcnkaQ9WUB7 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ClcnkaQ9WUB7 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClcnkaQ9WUB7 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.75□□□□□ -0.05
ClcnkaQ9WUB7 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClcnkaQ9WUB7 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClcnkaQ9WUB7 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClcnkaQ9WUB7 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ClcnkaQ9WUB7 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ClcnkaQ9WUB7 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
ClcnkaQ9WUB7 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ClcnkaQ9WUB7 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
ClcnkaQ9WUB7 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
ClcnkaQ9WUB7 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ClcnkaQ9WUB7 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
ClcnkaQ9WUB7 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
ClcnkaQ9WUB7 Gm10052-201ENSMUST00000168019 960 ntBASIC14.74□□□□□ -0.05
ClcnkaQ9WUB7 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
ClcnkaQ9WUB7 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
ClcnkaQ9WUB7 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ClcnkaQ9WUB7 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ClcnkaQ9WUB7 Gm7729-201ENSMUST00000050143 801 ntBASIC14.74□□□□□ -0.05
ClcnkaQ9WUB7 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ClcnkaQ9WUB7 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.74□□□□□ -0.05
ClcnkaQ9WUB7 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ClcnkaQ9WUB7 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ClcnkaQ9WUB7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ClcnkaQ9WUB7 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ClcnkaQ9WUB7 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ClcnkaQ9WUB7 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
ClcnkaQ9WUB7 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ClcnkaQ9WUB7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ClcnkaQ9WUB7 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ClcnkaQ9WUB7 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
ClcnkaQ9WUB7 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ClcnkaQ9WUB7 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
ClcnkaQ9WUB7 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ClcnkaQ9WUB7 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.73□□□□□ -0.05
ClcnkaQ9WUB7 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
ClcnkaQ9WUB7 Gm7977-201ENSMUST00000193787 748 ntBASIC14.73□□□□□ -0.05
ClcnkaQ9WUB7 Gm45328-201ENSMUST00000210942 917 ntBASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms