Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn8aQ9WTU3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn8aQ9WTU3 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn8aQ9WTU3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn8aQ9WTU3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn8aQ9WTU3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn8aQ9WTU3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn8aQ9WTU3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn8aQ9WTU3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn8aQ9WTU3 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn8aQ9WTU3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Scn8aQ9WTU3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Scn8aQ9WTU3 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.04■□□□□ 0.16
Scn8aQ9WTU3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn8aQ9WTU3 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Scn8aQ9WTU3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn8aQ9WTU3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Scn8aQ9WTU3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn8aQ9WTU3 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn8aQ9WTU3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn8aQ9WTU3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn8aQ9WTU3 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn8aQ9WTU3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Scn8aQ9WTU3 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.03■□□□□ 0.16
Scn8aQ9WTU3 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn8aQ9WTU3 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Scn8aQ9WTU3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn8aQ9WTU3 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn8aQ9WTU3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.03■□□□□ 0.16
Scn8aQ9WTU3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn8aQ9WTU3 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn8aQ9WTU3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn8aQ9WTU3 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn8aQ9WTU3 Gm7222-201ENSMUST00000117512 906 ntBASIC16.03■□□□□ 0.16
Scn8aQ9WTU3 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.03■□□□□ 0.16
Scn8aQ9WTU3 Gm18206-201ENSMUST00000207027 926 ntBASIC16.03■□□□□ 0.16
Scn8aQ9WTU3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.03■□□□□ 0.16
Scn8aQ9WTU3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Scn8aQ9WTU3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn8aQ9WTU3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn8aQ9WTU3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Scn8aQ9WTU3 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn8aQ9WTU3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn8aQ9WTU3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn8aQ9WTU3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn8aQ9WTU3 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn8aQ9WTU3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.02■□□□□ 0.16
Scn8aQ9WTU3 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.02■□□□□ 0.16
Scn8aQ9WTU3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn8aQ9WTU3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn8aQ9WTU3 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Scn8aQ9WTU3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn8aQ9WTU3 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn8aQ9WTU3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn8aQ9WTU3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.02■□□□□ 0.16
Scn8aQ9WTU3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scn8aQ9WTU3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Scn8aQ9WTU3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.02■□□□□ 0.15
Scn8aQ9WTU3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scn8aQ9WTU3 Gm4995-201ENSMUST00000117247 432 ntBASIC16.02■□□□□ 0.15
Scn8aQ9WTU3 Gm14140-201ENSMUST00000119999 995 ntBASIC16.02■□□□□ 0.15
Scn8aQ9WTU3 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.02■□□□□ 0.15
Scn8aQ9WTU3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.02■□□□□ 0.15
Scn8aQ9WTU3 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.02■□□□□ 0.15
Scn8aQ9WTU3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scn8aQ9WTU3 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.02■□□□□ 0.15
Scn8aQ9WTU3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.02■□□□□ 0.15
Scn8aQ9WTU3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.02■□□□□ 0.15
Scn8aQ9WTU3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Scn8aQ9WTU3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn8aQ9WTU3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn8aQ9WTU3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn8aQ9WTU3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn8aQ9WTU3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Scn8aQ9WTU3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Scn8aQ9WTU3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Scn8aQ9WTU3 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.01■□□□□ 0.15
Scn8aQ9WTU3 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.01■□□□□ 0.15
Scn8aQ9WTU3 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Scn8aQ9WTU3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn8aQ9WTU3 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.01■□□□□ 0.15
Scn8aQ9WTU3 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.01■□□□□ 0.15
Scn8aQ9WTU3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.01■□□□□ 0.15
Scn8aQ9WTU3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn8aQ9WTU3 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.01■□□□□ 0.15
Scn8aQ9WTU3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Scn8aQ9WTU3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16■□□□□ 0.15
Scn8aQ9WTU3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Scn8aQ9WTU3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16■□□□□ 0.15
Scn8aQ9WTU3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16■□□□□ 0.15
Scn8aQ9WTU3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Scn8aQ9WTU3 Gm19164-201ENSMUST00000210667 640 ntBASIC16■□□□□ 0.15
Scn8aQ9WTU3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Scn8aQ9WTU3 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16■□□□□ 0.15
Scn8aQ9WTU3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Scn8aQ9WTU3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Scn8aQ9WTU3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16■□□□□ 0.15
Scn8aQ9WTU3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Scn8aQ9WTU3 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Scn8aQ9WTU3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms