Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RpgrQ9R0X5 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RpgrQ9R0X5 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RpgrQ9R0X5 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RpgrQ9R0X5 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RpgrQ9R0X5 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RpgrQ9R0X5 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RpgrQ9R0X5 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RpgrQ9R0X5 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RpgrQ9R0X5 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RpgrQ9R0X5 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RpgrQ9R0X5 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.29■□□□□ 0.2
RpgrQ9R0X5 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RpgrQ9R0X5 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RpgrQ9R0X5 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RpgrQ9R0X5 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RpgrQ9R0X5 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RpgrQ9R0X5 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RpgrQ9R0X5 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RpgrQ9R0X5 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RpgrQ9R0X5 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RpgrQ9R0X5 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RpgrQ9R0X5 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RpgrQ9R0X5 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RpgrQ9R0X5 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RpgrQ9R0X5 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RpgrQ9R0X5 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RpgrQ9R0X5 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RpgrQ9R0X5 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RpgrQ9R0X5 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RpgrQ9R0X5 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RpgrQ9R0X5 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RpgrQ9R0X5 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.28■□□□□ 0.2
RpgrQ9R0X5 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
RpgrQ9R0X5 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RpgrQ9R0X5 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RpgrQ9R0X5 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RpgrQ9R0X5 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RpgrQ9R0X5 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RpgrQ9R0X5 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RpgrQ9R0X5 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RpgrQ9R0X5 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RpgrQ9R0X5 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RpgrQ9R0X5 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RpgrQ9R0X5 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RpgrQ9R0X5 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.27■□□□□ 0.2
RpgrQ9R0X5 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RpgrQ9R0X5 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RpgrQ9R0X5 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RpgrQ9R0X5 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RpgrQ9R0X5 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.27■□□□□ 0.2
RpgrQ9R0X5 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RpgrQ9R0X5 Gm25016-201ENSMUST00000158399 131 ntBASIC16.27■□□□□ 0.2
RpgrQ9R0X5 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.27■□□□□ 0.2
RpgrQ9R0X5 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RpgrQ9R0X5 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.27■□□□□ 0.2
RpgrQ9R0X5 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.27■□□□□ 0.2
RpgrQ9R0X5 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RpgrQ9R0X5 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RpgrQ9R0X5 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RpgrQ9R0X5 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RpgrQ9R0X5 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RpgrQ9R0X5 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RpgrQ9R0X5 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RpgrQ9R0X5 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.27■□□□□ 0.19
RpgrQ9R0X5 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
RpgrQ9R0X5 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RpgrQ9R0X5 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RpgrQ9R0X5 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RpgrQ9R0X5 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RpgrQ9R0X5 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RpgrQ9R0X5 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.27■□□□□ 0.19
RpgrQ9R0X5 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RpgrQ9R0X5 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RpgrQ9R0X5 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RpgrQ9R0X5 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RpgrQ9R0X5 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RpgrQ9R0X5 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RpgrQ9R0X5 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RpgrQ9R0X5 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RpgrQ9R0X5 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RpgrQ9R0X5 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RpgrQ9R0X5 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RpgrQ9R0X5 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RpgrQ9R0X5 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RpgrQ9R0X5 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RpgrQ9R0X5 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RpgrQ9R0X5 Gm9013-201ENSMUST00000132939 882 ntBASIC16.26■□□□□ 0.19
RpgrQ9R0X5 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RpgrQ9R0X5 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RpgrQ9R0X5 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RpgrQ9R0X5 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RpgrQ9R0X5 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RpgrQ9R0X5 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RpgrQ9R0X5 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RpgrQ9R0X5 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RpgrQ9R0X5 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RpgrQ9R0X5 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RpgrQ9R0X5 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RpgrQ9R0X5 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms