Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Gm11336-201ENSMUST00000118168 334 ntBASIC14.22□□□□□ -0.13
Nubp2Q9R061 Gm45328-201ENSMUST00000210942 917 ntBASIC14.22□□□□□ -0.13
Nubp2Q9R061 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nubp2Q9R061 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nubp2Q9R061 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Nubp2Q9R061 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nubp2Q9R061 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Nubp2Q9R061 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nubp2Q9R061 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nubp2Q9R061 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nubp2Q9R061 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nubp2Q9R061 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nubp2Q9R061 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nubp2Q9R061 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nubp2Q9R061 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nubp2Q9R061 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nubp2Q9R061 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nubp2Q9R061 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nubp2Q9R061 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nubp2Q9R061 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nubp2Q9R061 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nubp2Q9R061 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nubp2Q9R061 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nubp2Q9R061 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nubp2Q9R061 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Nubp2Q9R061 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nubp2Q9R061 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nubp2Q9R061 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nubp2Q9R061 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nubp2Q9R061 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nubp2Q9R061 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nubp2Q9R061 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Nubp2Q9R061 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Nubp2Q9R061 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nubp2Q9R061 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nubp2Q9R061 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nubp2Q9R061 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nubp2Q9R061 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nubp2Q9R061 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Nubp2Q9R061 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
Nubp2Q9R061 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp2Q9R061 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.2□□□□□ -0.14
Nubp2Q9R061 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Gm9103-201ENSMUST00000119371 405 ntBASIC14.2□□□□□ -0.14
Nubp2Q9R061 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.2□□□□□ -0.14
Nubp2Q9R061 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.2□□□□□ -0.14
Nubp2Q9R061 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Gm18115-201ENSMUST00000221209 621 ntBASIC14.2□□□□□ -0.14
Nubp2Q9R061 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.2□□□□□ -0.14
Nubp2Q9R061 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp2Q9R061 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp2Q9R061 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp2Q9R061 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp2Q9R061 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp2Q9R061 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp2Q9R061 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp2Q9R061 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Nubp2Q9R061 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp2Q9R061 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp2Q9R061 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.19□□□□□ -0.14
Nubp2Q9R061 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp2Q9R061 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp2Q9R061 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp2Q9R061 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.19□□□□□ -0.14
Nubp2Q9R061 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp2Q9R061 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp2Q9R061 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms