Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nubp1Q9R060 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Nubp1Q9R060 Gm13036-201ENSMUST00000117799 748 ntBASIC14.03□□□□□ -0.16
Nubp1Q9R060 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nubp1Q9R060 Gm12497-201ENSMUST00000138778 237 ntBASIC14.03□□□□□ -0.16
Nubp1Q9R060 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.03□□□□□ -0.16
Nubp1Q9R060 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nubp1Q9R060 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.03□□□□□ -0.16
Nubp1Q9R060 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.03□□□□□ -0.16
Nubp1Q9R060 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nubp1Q9R060 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.03□□□□□ -0.16
Nubp1Q9R060 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nubp1Q9R060 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nubp1Q9R060 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nubp1Q9R060 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Nubp1Q9R060 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nubp1Q9R060 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nubp1Q9R060 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nubp1Q9R060 Gm43339-201ENSMUST00000200032 1606 ntBASIC14.03□□□□□ -0.16
Nubp1Q9R060 Idnk-204ENSMUST00000226010 1898 ntBASIC14.03□□□□□ -0.16
Nubp1Q9R060 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nubp1Q9R060 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nubp1Q9R060 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.03□□□□□ -0.16
Nubp1Q9R060 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nubp1Q9R060 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nubp1Q9R060 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nubp1Q9R060 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nubp1Q9R060 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nubp1Q9R060 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nubp1Q9R060 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.02□□□□□ -0.16
Nubp1Q9R060 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Nubp1Q9R060 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nubp1Q9R060 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.02□□□□□ -0.16
Nubp1Q9R060 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nubp1Q9R060 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nubp1Q9R060 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Nubp1Q9R060 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nubp1Q9R060 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.02□□□□□ -0.17
Nubp1Q9R060 Defa-ps4-201ENSMUST00000118021 183 ntBASIC14.02□□□□□ -0.17
Nubp1Q9R060 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nubp1Q9R060 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Nubp1Q9R060 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nubp1Q9R060 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.02□□□□□ -0.17
Nubp1Q9R060 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nubp1Q9R060 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC14.02□□□□□ -0.17
Nubp1Q9R060 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.02□□□□□ -0.17
Nubp1Q9R060 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nubp1Q9R060 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nubp1Q9R060 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.02□□□□□ -0.17
Nubp1Q9R060 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nubp1Q9R060 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.02□□□□□ -0.17
Nubp1Q9R060 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nubp1Q9R060 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Nubp1Q9R060 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nubp1Q9R060 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nubp1Q9R060 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Nubp1Q9R060 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nubp1Q9R060 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nubp1Q9R060 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.01□□□□□ -0.17
Nubp1Q9R060 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Nubp1Q9R060 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nubp1Q9R060 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nubp1Q9R060 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nubp1Q9R060 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.01□□□□□ -0.17
Nubp1Q9R060 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.01□□□□□ -0.17
Nubp1Q9R060 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.01□□□□□ -0.17
Nubp1Q9R060 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.01□□□□□ -0.17
Nubp1Q9R060 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Nubp1Q9R060 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Nubp1Q9R060 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nubp1Q9R060 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Nubp1Q9R060 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nubp1Q9R060 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nubp1Q9R060 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nubp1Q9R060 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nubp1Q9R060 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nubp1Q9R060 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nubp1Q9R060 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nubp1Q9R060 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nubp1Q9R060 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nubp1Q9R060 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nubp1Q9R060 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14□□□□□ -0.17
Nubp1Q9R060 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nubp1Q9R060 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nubp1Q9R060 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nubp1Q9R060 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nubp1Q9R060 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nubp1Q9R060 Gm8097-201ENSMUST00000117903 829 ntBASIC14□□□□□ -0.17
Nubp1Q9R060 Gm14542-201ENSMUST00000118460 1248 ntBASIC14□□□□□ -0.17
Nubp1Q9R060 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nubp1Q9R060 Gm37584-201ENSMUST00000193595 1290 ntBASIC14□□□□□ -0.17
Nubp1Q9R060 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14□□□□□ -0.17
Nubp1Q9R060 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14□□□□□ -0.17
Nubp1Q9R060 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Nubp1Q9R060 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nubp1Q9R060 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nubp1Q9R060 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nubp1Q9R060 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Nubp1Q9R060 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nubp1Q9R060 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms