Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Gtf3c6Q9D8P7 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf3c6Q9D8P7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf3c6Q9D8P7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Gtf3c6Q9D8P7 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf3c6Q9D8P7 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf3c6Q9D8P7 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf3c6Q9D8P7 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf3c6Q9D8P7 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Gtf3c6Q9D8P7 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf3c6Q9D8P7 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf3c6Q9D8P7 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf3c6Q9D8P7 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf3c6Q9D8P7 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf3c6Q9D8P7 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf3c6Q9D8P7 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.11■□□□□ 0.33
Gtf3c6Q9D8P7 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf3c6Q9D8P7 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf3c6Q9D8P7 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.11■□□□□ 0.33
Gtf3c6Q9D8P7 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf3c6Q9D8P7 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Gtf3c6Q9D8P7 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf3c6Q9D8P7 Mir6404-201ENSMUST00000183699 94 ntBASIC17.11■□□□□ 0.33
Gtf3c6Q9D8P7 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf3c6Q9D8P7 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Gtf3c6Q9D8P7 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf3c6Q9D8P7 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf3c6Q9D8P7 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gtf3c6Q9D8P7 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf3c6Q9D8P7 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf3c6Q9D8P7 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Gtf3c6Q9D8P7 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf3c6Q9D8P7 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Gtf3c6Q9D8P7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Gtf3c6Q9D8P7 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf3c6Q9D8P7 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Gtf3c6Q9D8P7 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c6Q9D8P7 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c6Q9D8P7 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c6Q9D8P7 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.1■□□□□ 0.33
Gtf3c6Q9D8P7 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c6Q9D8P7 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gtf3c6Q9D8P7 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.1■□□□□ 0.33
Gtf3c6Q9D8P7 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c6Q9D8P7 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.1■□□□□ 0.33
Gtf3c6Q9D8P7 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Gtf3c6Q9D8P7 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c6Q9D8P7 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.1■□□□□ 0.33
Gtf3c6Q9D8P7 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c6Q9D8P7 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c6Q9D8P7 Gm13836-201ENSMUST00000121159 501 ntBASIC17.1■□□□□ 0.33
Gtf3c6Q9D8P7 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c6Q9D8P7 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.1■□□□□ 0.33
Gtf3c6Q9D8P7 Gm29518-201ENSMUST00000190858 372 ntBASIC17.1■□□□□ 0.33
Gtf3c6Q9D8P7 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.1■□□□□ 0.33
Gtf3c6Q9D8P7 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c6Q9D8P7 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c6Q9D8P7 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gtf3c6Q9D8P7 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c6Q9D8P7 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c6Q9D8P7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c6Q9D8P7 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Gtf3c6Q9D8P7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c6Q9D8P7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c6Q9D8P7 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c6Q9D8P7 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c6Q9D8P7 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c6Q9D8P7 AA414768-201ENSMUST00000121924 1257 ntBASIC17.09■□□□□ 0.33
Gtf3c6Q9D8P7 Mir7071-201ENSMUST00000184847 69 ntBASIC17.09■□□□□ 0.33
Gtf3c6Q9D8P7 Gm17808-201ENSMUST00000200859 894 ntBASIC17.09■□□□□ 0.33
Gtf3c6Q9D8P7 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c6Q9D8P7 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Gtf3c6Q9D8P7 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c6Q9D8P7 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c6Q9D8P7 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c6Q9D8P7 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Gtf3c6Q9D8P7 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c6Q9D8P7 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c6Q9D8P7 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c6Q9D8P7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Gtf3c6Q9D8P7 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.09■□□□□ 0.33
Gtf3c6Q9D8P7 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c6Q9D8P7 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gtf3c6Q9D8P7 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Gtf3c6Q9D8P7 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gtf3c6Q9D8P7 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Gtf3c6Q9D8P7 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gtf3c6Q9D8P7 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gtf3c6Q9D8P7 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.08■□□□□ 0.33
Gtf3c6Q9D8P7 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Gtf3c6Q9D8P7 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Gtf3c6Q9D8P7 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf3c6Q9D8P7 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf3c6Q9D8P7 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf3c6Q9D8P7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf3c6Q9D8P7 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf3c6Q9D8P7 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf3c6Q9D8P7 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf3c6Q9D8P7 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf3c6Q9D8P7 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms