Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Upk3bl1Q9D701 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Upk3bl1Q9D701 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Upk3bl1Q9D701 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Upk3bl1Q9D701 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Upk3bl1Q9D701 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Upk3bl1Q9D701 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.61□□□□□ -0.07
Upk3bl1Q9D701 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Upk3bl1Q9D701 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Upk3bl1Q9D701 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Upk3bl1Q9D701 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Upk3bl1Q9D701 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Upk3bl1Q9D701 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Upk3bl1Q9D701 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Upk3bl1Q9D701 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Upk3bl1Q9D701 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Upk3bl1Q9D701 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Upk3bl1Q9D701 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Upk3bl1Q9D701 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Upk3bl1Q9D701 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Upk3bl1Q9D701 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Upk3bl1Q9D701 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Upk3bl1Q9D701 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Upk3bl1Q9D701 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Upk3bl1Q9D701 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Upk3bl1Q9D701 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Upk3bl1Q9D701 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.61□□□□□ -0.07
Upk3bl1Q9D701 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Upk3bl1Q9D701 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Upk3bl1Q9D701 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Upk3bl1Q9D701 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Upk3bl1Q9D701 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Upk3bl1Q9D701 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Upk3bl1Q9D701 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Upk3bl1Q9D701 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Upk3bl1Q9D701 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Upk3bl1Q9D701 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Upk3bl1Q9D701 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Upk3bl1Q9D701 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Upk3bl1Q9D701 Gm13148-201ENSMUST00000118892 745 ntBASIC14.6□□□□□ -0.07
Upk3bl1Q9D701 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Upk3bl1Q9D701 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.6□□□□□ -0.07
Upk3bl1Q9D701 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.6□□□□□ -0.07
Upk3bl1Q9D701 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.6□□□□□ -0.07
Upk3bl1Q9D701 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
Upk3bl1Q9D701 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.6□□□□□ -0.07
Upk3bl1Q9D701 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Upk3bl1Q9D701 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Upk3bl1Q9D701 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Upk3bl1Q9D701 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Upk3bl1Q9D701 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Upk3bl1Q9D701 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Upk3bl1Q9D701 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Upk3bl1Q9D701 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Upk3bl1Q9D701 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Upk3bl1Q9D701 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.59□□□□□ -0.07
Upk3bl1Q9D701 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Upk3bl1Q9D701 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Upk3bl1Q9D701 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Upk3bl1Q9D701 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Upk3bl1Q9D701 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Upk3bl1Q9D701 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.59□□□□□ -0.07
Upk3bl1Q9D701 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.59□□□□□ -0.07
Upk3bl1Q9D701 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.59□□□□□ -0.07
Upk3bl1Q9D701 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Upk3bl1Q9D701 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Upk3bl1Q9D701 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Upk3bl1Q9D701 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Upk3bl1Q9D701 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Upk3bl1Q9D701 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Upk3bl1Q9D701 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Upk3bl1Q9D701 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Upk3bl1Q9D701 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Upk3bl1Q9D701 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Upk3bl1Q9D701 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.59□□□□□ -0.07
Upk3bl1Q9D701 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Upk3bl1Q9D701 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Upk3bl1Q9D701 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Upk3bl1Q9D701 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Upk3bl1Q9D701 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Upk3bl1Q9D701 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Upk3bl1Q9D701 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Upk3bl1Q9D701 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.58□□□□□ -0.07
Upk3bl1Q9D701 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Upk3bl1Q9D701 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Upk3bl1Q9D701 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Upk3bl1Q9D701 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Upk3bl1Q9D701 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Upk3bl1Q9D701 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Upk3bl1Q9D701 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Upk3bl1Q9D701 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Upk3bl1Q9D701 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Upk3bl1Q9D701 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Upk3bl1Q9D701 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Upk3bl1Q9D701 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Upk3bl1Q9D701 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.58□□□□□ -0.08
Upk3bl1Q9D701 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Upk3bl1Q9D701 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.58□□□□□ -0.08
Upk3bl1Q9D701 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Upk3bl1Q9D701 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms