Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Cfap53Q9D439 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cfap53Q9D439 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cfap53Q9D439 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Cfap53Q9D439 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cfap53Q9D439 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cfap53Q9D439 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cfap53Q9D439 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cfap53Q9D439 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cfap53Q9D439 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cfap53Q9D439 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cfap53Q9D439 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cfap53Q9D439 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cfap53Q9D439 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cfap53Q9D439 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cfap53Q9D439 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cfap53Q9D439 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cfap53Q9D439 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cfap53Q9D439 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cfap53Q9D439 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cfap53Q9D439 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cfap53Q9D439 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cfap53Q9D439 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cfap53Q9D439 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Cfap53Q9D439 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Cfap53Q9D439 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cfap53Q9D439 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cfap53Q9D439 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cfap53Q9D439 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cfap53Q9D439 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cfap53Q9D439 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
Cfap53Q9D439 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cfap53Q9D439 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cfap53Q9D439 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.57■□□□□ 0.4
Cfap53Q9D439 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cfap53Q9D439 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cfap53Q9D439 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cfap53Q9D439 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cfap53Q9D439 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cfap53Q9D439 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cfap53Q9D439 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.57■□□□□ 0.4
Cfap53Q9D439 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cfap53Q9D439 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cfap53Q9D439 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cfap53Q9D439 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cfap53Q9D439 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cfap53Q9D439 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cfap53Q9D439 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cfap53Q9D439 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cfap53Q9D439 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.56■□□□□ 0.4
Cfap53Q9D439 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cfap53Q9D439 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cfap53Q9D439 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cfap53Q9D439 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cfap53Q9D439 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cfap53Q9D439 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cfap53Q9D439 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cfap53Q9D439 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cfap53Q9D439 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Cfap53Q9D439 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.56■□□□□ 0.4
Cfap53Q9D439 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cfap53Q9D439 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cfap53Q9D439 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cfap53Q9D439 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cfap53Q9D439 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.56■□□□□ 0.4
Cfap53Q9D439 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cfap53Q9D439 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cfap53Q9D439 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.56■□□□□ 0.4
Cfap53Q9D439 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cfap53Q9D439 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cfap53Q9D439 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cfap53Q9D439 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cfap53Q9D439 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.56■□□□□ 0.4
Cfap53Q9D439 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap53Q9D439 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap53Q9D439 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cfap53Q9D439 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cfap53Q9D439 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Cfap53Q9D439 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.55■□□□□ 0.4
Cfap53Q9D439 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.55■□□□□ 0.4
Cfap53Q9D439 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap53Q9D439 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap53Q9D439 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap53Q9D439 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Cfap53Q9D439 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap53Q9D439 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap53Q9D439 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap53Q9D439 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap53Q9D439 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.55■□□□□ 0.4
Cfap53Q9D439 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap53Q9D439 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap53Q9D439 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap53Q9D439 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap53Q9D439 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cfap53Q9D439 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap53Q9D439 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap53Q9D439 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap53Q9D439 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap53Q9D439 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cfap53Q9D439 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms