Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nip7Q9CXK8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nip7Q9CXK8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.87■□□□□ 0.77
Nip7Q9CXK8 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nip7Q9CXK8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nip7Q9CXK8 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
Nip7Q9CXK8 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC19.87■□□□□ 0.77
Nip7Q9CXK8 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nip7Q9CXK8 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC19.87■□□□□ 0.77
Nip7Q9CXK8 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Nip7Q9CXK8 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC19.87■□□□□ 0.77
Nip7Q9CXK8 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nip7Q9CXK8 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Nip7Q9CXK8 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nip7Q9CXK8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nip7Q9CXK8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nip7Q9CXK8 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nip7Q9CXK8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nip7Q9CXK8 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC19.87■□□□□ 0.77
Nip7Q9CXK8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nip7Q9CXK8 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nip7Q9CXK8 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC19.86■□□□□ 0.77
Nip7Q9CXK8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nip7Q9CXK8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nip7Q9CXK8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nip7Q9CXK8 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nip7Q9CXK8 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.86■□□□□ 0.77
Nip7Q9CXK8 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC19.86■□□□□ 0.77
Nip7Q9CXK8 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nip7Q9CXK8 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC19.86■□□□□ 0.77
Nip7Q9CXK8 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nip7Q9CXK8 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nip7Q9CXK8 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nip7Q9CXK8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nip7Q9CXK8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nip7Q9CXK8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nip7Q9CXK8 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nip7Q9CXK8 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nip7Q9CXK8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nip7Q9CXK8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.85■□□□□ 0.77
Nip7Q9CXK8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nip7Q9CXK8 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nip7Q9CXK8 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nip7Q9CXK8 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC19.85■□□□□ 0.77
Nip7Q9CXK8 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC19.85■□□□□ 0.77
Nip7Q9CXK8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Nip7Q9CXK8 AC159295.1-201ENSMUST00000225326 940 ntBASIC19.85■□□□□ 0.77
Nip7Q9CXK8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nip7Q9CXK8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nip7Q9CXK8 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nip7Q9CXK8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Nip7Q9CXK8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Nip7Q9CXK8 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nip7Q9CXK8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nip7Q9CXK8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nip7Q9CXK8 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nip7Q9CXK8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nip7Q9CXK8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nip7Q9CXK8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nip7Q9CXK8 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nip7Q9CXK8 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC19.84■□□□□ 0.77
Nip7Q9CXK8 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nip7Q9CXK8 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Nip7Q9CXK8 Gm17271-201ENSMUST00000165535 355 ntBASIC19.84■□□□□ 0.77
Nip7Q9CXK8 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nip7Q9CXK8 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nip7Q9CXK8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nip7Q9CXK8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nip7Q9CXK8 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nip7Q9CXK8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nip7Q9CXK8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nip7Q9CXK8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nip7Q9CXK8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nip7Q9CXK8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Nip7Q9CXK8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nip7Q9CXK8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Nip7Q9CXK8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
Nip7Q9CXK8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nip7Q9CXK8 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nip7Q9CXK8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nip7Q9CXK8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nip7Q9CXK8 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC19.83■□□□□ 0.77
Nip7Q9CXK8 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Nip7Q9CXK8 Gm10576-201ENSMUST00000191927 825 ntBASIC19.83■□□□□ 0.77
Nip7Q9CXK8 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nip7Q9CXK8 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nip7Q9CXK8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nip7Q9CXK8 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nip7Q9CXK8 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Nip7Q9CXK8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nip7Q9CXK8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nip7Q9CXK8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Nip7Q9CXK8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nip7Q9CXK8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nip7Q9CXK8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Nip7Q9CXK8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Nip7Q9CXK8 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nip7Q9CXK8 Wnt10b-206ENSMUST00000228546 2709 ntBASIC19.82■□□□□ 0.76
Nip7Q9CXK8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nip7Q9CXK8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms