Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lrrc40Q9CRC8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lrrc40Q9CRC8 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lrrc40Q9CRC8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lrrc40Q9CRC8 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lrrc40Q9CRC8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lrrc40Q9CRC8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lrrc40Q9CRC8 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lrrc40Q9CRC8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Lrrc40Q9CRC8 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Lrrc40Q9CRC8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lrrc40Q9CRC8 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lrrc40Q9CRC8 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lrrc40Q9CRC8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Lrrc40Q9CRC8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Lrrc40Q9CRC8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Lrrc40Q9CRC8 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.91■□□□□ 0.14
Lrrc40Q9CRC8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lrrc40Q9CRC8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lrrc40Q9CRC8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
Lrrc40Q9CRC8 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Lrrc40Q9CRC8 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Lrrc40Q9CRC8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lrrc40Q9CRC8 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Lrrc40Q9CRC8 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lrrc40Q9CRC8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lrrc40Q9CRC8 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lrrc40Q9CRC8 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lrrc40Q9CRC8 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Lrrc40Q9CRC8 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
Lrrc40Q9CRC8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lrrc40Q9CRC8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lrrc40Q9CRC8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lrrc40Q9CRC8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lrrc40Q9CRC8 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.91■□□□□ 0.14
Lrrc40Q9CRC8 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lrrc40Q9CRC8 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Lrrc40Q9CRC8 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
Lrrc40Q9CRC8 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lrrc40Q9CRC8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Lrrc40Q9CRC8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Lrrc40Q9CRC8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Lrrc40Q9CRC8 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lrrc40Q9CRC8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.9■□□□□ 0.14
Lrrc40Q9CRC8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lrrc40Q9CRC8 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lrrc40Q9CRC8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lrrc40Q9CRC8 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Lrrc40Q9CRC8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.9■□□□□ 0.14
Lrrc40Q9CRC8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Lrrc40Q9CRC8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lrrc40Q9CRC8 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Lrrc40Q9CRC8 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lrrc40Q9CRC8 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Lrrc40Q9CRC8 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lrrc40Q9CRC8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Lrrc40Q9CRC8 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Lrrc40Q9CRC8 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lrrc40Q9CRC8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lrrc40Q9CRC8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lrrc40Q9CRC8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Lrrc40Q9CRC8 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Lrrc40Q9CRC8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lrrc40Q9CRC8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lrrc40Q9CRC8 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Lrrc40Q9CRC8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms