Protein–RNA interactions for Protein: Q9CQ82

Itgb3bp, Centromere protein R, mousemouse

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3bpQ9CQ82 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Gm22240-201ENSMUST00000175225 82 ntBASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3bpQ9CQ82 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.84□□□□□ -0.03
Itgb3bpQ9CQ82 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Itgb3bpQ9CQ82 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3bpQ9CQ82 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3bpQ9CQ82 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3bpQ9CQ82 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3bpQ9CQ82 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.84□□□□□ -0.03
Itgb3bpQ9CQ82 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.84□□□□□ -0.03
Itgb3bpQ9CQ82 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3bpQ9CQ82 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3bpQ9CQ82 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.84□□□□□ -0.03
Itgb3bpQ9CQ82 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3bpQ9CQ82 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.84□□□□□ -0.03
Itgb3bpQ9CQ82 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.84□□□□□ -0.03
Itgb3bpQ9CQ82 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3bpQ9CQ82 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3bpQ9CQ82 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3bpQ9CQ82 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3bpQ9CQ82 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3bpQ9CQ82 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3bpQ9CQ82 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3bpQ9CQ82 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3bpQ9CQ82 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3bpQ9CQ82 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3bpQ9CQ82 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3bpQ9CQ82 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3bpQ9CQ82 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3bpQ9CQ82 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Itgb3bpQ9CQ82 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Itgb3bpQ9CQ82 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Itgb3bpQ9CQ82 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Itgb3bpQ9CQ82 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Itgb3bpQ9CQ82 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.83□□□□□ -0.03
Itgb3bpQ9CQ82 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Itgb3bpQ9CQ82 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Itgb3bpQ9CQ82 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Itgb3bpQ9CQ82 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Itgb3bpQ9CQ82 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Itgb3bpQ9CQ82 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Itgb3bpQ9CQ82 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Itgb3bpQ9CQ82 Gm21814-202ENSMUST00000203277 873 ntBASIC14.83□□□□□ -0.04
Itgb3bpQ9CQ82 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Itgb3bpQ9CQ82 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Itgb3bpQ9CQ82 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Itgb3bpQ9CQ82 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Itgb3bpQ9CQ82 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Itgb3bpQ9CQ82 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Itgb3bpQ9CQ82 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Itgb3bpQ9CQ82 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.83□□□□□ -0.04
Itgb3bpQ9CQ82 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Itgb3bpQ9CQ82 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Itgb3bpQ9CQ82 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Itgb3bpQ9CQ82 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Itgb3bpQ9CQ82 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Itgb3bpQ9CQ82 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Itgb3bpQ9CQ82 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Itgb3bpQ9CQ82 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Itgb3bpQ9CQ82 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Itgb3bpQ9CQ82 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Itgb3bpQ9CQ82 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Itgb3bpQ9CQ82 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Itgb3bpQ9CQ82 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Itgb3bpQ9CQ82 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Itgb3bpQ9CQ82 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Itgb3bpQ9CQ82 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Itgb3bpQ9CQ82 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms