Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Rtn4Q99P72 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn4Q99P72 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Rtn4Q99P72 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn4Q99P72 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC20.42■□□□□ 0.86
Rtn4Q99P72 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn4Q99P72 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn4Q99P72 Cmtm5-203ENSMUST00000227441 610 ntBASIC20.42■□□□□ 0.86
Rtn4Q99P72 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn4Q99P72 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC20.42■□□□□ 0.86
Rtn4Q99P72 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn4Q99P72 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Rtn4Q99P72 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn4Q99P72 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn4Q99P72 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn4Q99P72 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn4Q99P72 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Rtn4Q99P72 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn4Q99P72 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn4Q99P72 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn4Q99P72 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn4Q99P72 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn4Q99P72 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Rtn4Q99P72 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn4Q99P72 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn4Q99P72 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn4Q99P72 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn4Q99P72 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Rtn4Q99P72 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC20.41■□□□□ 0.86
Rtn4Q99P72 Gm27459-201ENSMUST00000184860 107 ntBASIC20.41■□□□□ 0.86
Rtn4Q99P72 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC20.41■□□□□ 0.86
Rtn4Q99P72 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC20.41■□□□□ 0.86
Rtn4Q99P72 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn4Q99P72 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn4Q99P72 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Rtn4Q99P72 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn4Q99P72 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.41■□□□□ 0.86
Rtn4Q99P72 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Rtn4Q99P72 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn4Q99P72 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.4■□□□□ 0.86
Rtn4Q99P72 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn4Q99P72 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC20.4■□□□□ 0.86
Rtn4Q99P72 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn4Q99P72 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn4Q99P72 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn4Q99P72 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC20.4■□□□□ 0.86
Rtn4Q99P72 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Rtn4Q99P72 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn4Q99P72 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn4Q99P72 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Rtn4Q99P72 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn4Q99P72 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn4Q99P72 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn4Q99P72 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn4Q99P72 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn4Q99P72 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Rtn4Q99P72 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.39■□□□□ 0.86
Rtn4Q99P72 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rtn4Q99P72 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Rtn4Q99P72 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rtn4Q99P72 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rtn4Q99P72 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Rtn4Q99P72 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtn4Q99P72 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtn4Q99P72 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rtn4Q99P72 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rtn4Q99P72 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC20.39■□□□□ 0.85
Rtn4Q99P72 Gm45359-201ENSMUST00000210635 427 ntBASIC20.39■□□□□ 0.85
Rtn4Q99P72 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtn4Q99P72 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtn4Q99P72 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtn4Q99P72 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rtn4Q99P72 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Rtn4Q99P72 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtn4Q99P72 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtn4Q99P72 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rtn4Q99P72 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn4Q99P72 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn4Q99P72 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn4Q99P72 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Rtn4Q99P72 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn4Q99P72 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn4Q99P72 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC20.38■□□□□ 0.85
Rtn4Q99P72 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn4Q99P72 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn4Q99P72 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Rtn4Q99P72 Mir8098-201ENSMUST00000184011 137 ntBASIC20.38■□□□□ 0.85
Rtn4Q99P72 Gm28975-201ENSMUST00000186412 686 ntBASIC20.38■□□□□ 0.85
Rtn4Q99P72 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC20.38■□□□□ 0.85
Rtn4Q99P72 Gm8969-201ENSMUST00000199694 526 ntBASIC20.38■□□□□ 0.85
Rtn4Q99P72 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC20.38■□□□□ 0.85
Rtn4Q99P72 AC153889.1-201ENSMUST00000219257 330 ntBASIC20.38■□□□□ 0.85
Rtn4Q99P72 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn4Q99P72 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn4Q99P72 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn4Q99P72 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC20.38■□□□□ 0.85
Rtn4Q99P72 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn4Q99P72 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn4Q99P72 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn4Q99P72 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms