Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm4459-201ENSMUST00000118750 468 ntBASIC16.54■□□□□ 0.24
Col25a1Q99MQ5 Gm12497-201ENSMUST00000138778 237 ntBASIC16.54■□□□□ 0.24
Col25a1Q99MQ5 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Col25a1Q99MQ5 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col25a1Q99MQ5 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Col25a1Q99MQ5 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Col25a1Q99MQ5 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col25a1Q99MQ5 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col25a1Q99MQ5 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col25a1Q99MQ5 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col25a1Q99MQ5 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col25a1Q99MQ5 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col25a1Q99MQ5 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col25a1Q99MQ5 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Col25a1Q99MQ5 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.54■□□□□ 0.24
Col25a1Q99MQ5 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col25a1Q99MQ5 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col25a1Q99MQ5 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col25a1Q99MQ5 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col25a1Q99MQ5 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col25a1Q99MQ5 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col25a1Q99MQ5 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
Col25a1Q99MQ5 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col25a1Q99MQ5 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col25a1Q99MQ5 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col25a1Q99MQ5 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col25a1Q99MQ5 Gm43474-201ENSMUST00000196415 774 ntBASIC16.53■□□□□ 0.24
Col25a1Q99MQ5 Gm44450-201ENSMUST00000199528 114 ntBASIC16.53■□□□□ 0.24
Col25a1Q99MQ5 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.53■□□□□ 0.24
Col25a1Q99MQ5 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Col25a1Q99MQ5 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col25a1Q99MQ5 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Col25a1Q99MQ5 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col25a1Q99MQ5 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.53■□□□□ 0.24
Col25a1Q99MQ5 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col25a1Q99MQ5 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col25a1Q99MQ5 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col25a1Q99MQ5 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col25a1Q99MQ5 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col25a1Q99MQ5 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col25a1Q99MQ5 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Col25a1Q99MQ5 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col25a1Q99MQ5 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col25a1Q99MQ5 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Col25a1Q99MQ5 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Col25a1Q99MQ5 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Col25a1Q99MQ5 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.52■□□□□ 0.24
Col25a1Q99MQ5 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC16.52■□□□□ 0.24
Col25a1Q99MQ5 Gm9794-201ENSMUST00000202370 423 ntBASIC16.52■□□□□ 0.24
Col25a1Q99MQ5 Gm18421-201ENSMUST00000204122 625 ntBASIC16.52■□□□□ 0.24
Col25a1Q99MQ5 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col25a1Q99MQ5 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Col25a1Q99MQ5 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col25a1Q99MQ5 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col25a1Q99MQ5 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col25a1Q99MQ5 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col25a1Q99MQ5 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.52■□□□□ 0.23
Col25a1Q99MQ5 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Haglr-201ENSMUST00000100000 2085 ntBASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Gm12151-201ENSMUST00000121374 290 ntBASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Mir7085-201ENSMUST00000184353 66 ntBASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Gm8655-201ENSMUST00000221159 852 ntBASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Col25a1Q99MQ5 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Col25a1Q99MQ5 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms