Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Gm36967-201ENSMUST00000193814 266 ntBASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx6-1Q99MA9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx6-1Q99MA9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx6-1Q99MA9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx6-1Q99MA9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx6-1Q99MA9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Nkx6-1Q99MA9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx6-1Q99MA9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx6-1Q99MA9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Nkx6-1Q99MA9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx6-1Q99MA9 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx6-1Q99MA9 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx6-1Q99MA9 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.96□□□□□ -0.01
Nkx6-1Q99MA9 Gm4899-201ENSMUST00000178708 719 ntBASIC14.96□□□□□ -0.01
Nkx6-1Q99MA9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.96□□□□□ -0.01
Nkx6-1Q99MA9 Gm44492-201ENSMUST00000197012 141 ntBASIC14.96□□□□□ -0.01
Nkx6-1Q99MA9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx6-1Q99MA9 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.96□□□□□ -0.01
Nkx6-1Q99MA9 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx6-1Q99MA9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx6-1Q99MA9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx6-1Q99MA9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx6-1Q99MA9 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx6-1Q99MA9 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx6-1Q99MA9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx6-1Q99MA9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx6-1Q99MA9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx6-1Q99MA9 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Nkx6-1Q99MA9 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Nkx6-1Q99MA9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Nkx6-1Q99MA9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Nkx6-1Q99MA9 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Nkx6-1Q99MA9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Nkx6-1Q99MA9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Nkx6-1Q99MA9 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx6-1Q99MA9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx6-1Q99MA9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx6-1Q99MA9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Nkx6-1Q99MA9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx6-1Q99MA9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx6-1Q99MA9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Nkx6-1Q99MA9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx6-1Q99MA9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.95□□□□□ -0.02
Nkx6-1Q99MA9 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Nkx6-1Q99MA9 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx6-1Q99MA9 Gm13616-201ENSMUST00000120600 222 ntBASIC14.95□□□□□ -0.02
Nkx6-1Q99MA9 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx6-1Q99MA9 AA543401-201ENSMUST00000164248 1269 ntBASIC14.95□□□□□ -0.02
Nkx6-1Q99MA9 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.95□□□□□ -0.02
Nkx6-1Q99MA9 Gm37153-201ENSMUST00000193637 231 ntBASIC14.95□□□□□ -0.02
Nkx6-1Q99MA9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Nkx6-1Q99MA9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx6-1Q99MA9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx6-1Q99MA9 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.95□□□□□ -0.02
Nkx6-1Q99MA9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx6-1Q99MA9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx6-1Q99MA9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx6-1Q99MA9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx6-1Q99MA9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx6-1Q99MA9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx6-1Q99MA9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx6-1Q99MA9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Nkx6-1Q99MA9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx6-1Q99MA9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.94□□□□□ -0.02
Nkx6-1Q99MA9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx6-1Q99MA9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.94□□□□□ -0.02
Nkx6-1Q99MA9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx6-1Q99MA9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx6-1Q99MA9 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx6-1Q99MA9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
Nkx6-1Q99MA9 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Nkx6-1Q99MA9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx6-1Q99MA9 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Nkx6-1Q99MA9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx6-1Q99MA9 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.94□□□□□ -0.02
Nkx6-1Q99MA9 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx6-1Q99MA9 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Nkx6-1Q99MA9 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.94□□□□□ -0.02
Nkx6-1Q99MA9 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Nkx6-1Q99MA9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx6-1Q99MA9 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx6-1Q99MA9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms