Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk9Q99J95 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk9Q99J95 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk9Q99J95 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk9Q99J95 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk9Q99J95 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk9Q99J95 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk9Q99J95 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk9Q99J95 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
Cdk9Q99J95 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.15■□□□□ 0.18
Cdk9Q99J95 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk9Q99J95 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk9Q99J95 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk9Q99J95 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cdk9Q99J95 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Cdk9Q99J95 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk9Q99J95 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.15■□□□□ 0.18
Cdk9Q99J95 Gm18958-201ENSMUST00000174258 762 ntBASIC16.15■□□□□ 0.18
Cdk9Q99J95 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cdk9Q99J95 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk9Q99J95 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.15■□□□□ 0.18
Cdk9Q99J95 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk9Q99J95 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk9Q99J95 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk9Q99J95 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk9Q99J95 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk9Q99J95 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk9Q99J95 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk9Q99J95 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cdk9Q99J95 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk9Q99J95 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk9Q99J95 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk9Q99J95 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.15■□□□□ 0.18
Cdk9Q99J95 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk9Q99J95 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.15■□□□□ 0.18
Cdk9Q99J95 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cdk9Q99J95 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cdk9Q99J95 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk9Q99J95 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cdk9Q99J95 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk9Q99J95 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk9Q99J95 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk9Q99J95 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cdk9Q99J95 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk9Q99J95 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Cdk9Q99J95 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk9Q99J95 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk9Q99J95 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk9Q99J95 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk9Q99J95 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.14■□□□□ 0.17
Cdk9Q99J95 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk9Q99J95 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.14■□□□□ 0.17
Cdk9Q99J95 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.14■□□□□ 0.17
Cdk9Q99J95 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.14■□□□□ 0.17
Cdk9Q99J95 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk9Q99J95 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk9Q99J95 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk9Q99J95 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk9Q99J95 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk9Q99J95 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk9Q99J95 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.14■□□□□ 0.17
Cdk9Q99J95 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk9Q99J95 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.14■□□□□ 0.17
Cdk9Q99J95 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk9Q99J95 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cdk9Q99J95 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk9Q99J95 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk9Q99J95 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk9Q99J95 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cdk9Q99J95 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk9Q99J95 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk9Q99J95 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.13■□□□□ 0.17
Cdk9Q99J95 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk9Q99J95 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk9Q99J95 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk9Q99J95 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk9Q99J95 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk9Q99J95 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk9Q99J95 Gm7638-201ENSMUST00000121348 967 ntBASIC16.13■□□□□ 0.17
Cdk9Q99J95 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cdk9Q99J95 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk9Q99J95 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Cdk9Q99J95 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk9Q99J95 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk9Q99J95 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.13■□□□□ 0.17
Cdk9Q99J95 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk9Q99J95 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk9Q99J95 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk9Q99J95 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk9Q99J95 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk9Q99J95 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk9Q99J95 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cdk9Q99J95 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk9Q99J95 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Cdk9Q99J95 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Cdk9Q99J95 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk9Q99J95 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Cdk9Q99J95 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdk9Q99J95 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cdk9Q99J95 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms