Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Col20a1Q923P0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Col20a1Q923P0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.86■□□□□ 0.61
Col20a1Q923P0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col20a1Q923P0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col20a1Q923P0 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Col20a1Q923P0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.85■□□□□ 0.61
Col20a1Q923P0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col20a1Q923P0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col20a1Q923P0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col20a1Q923P0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col20a1Q923P0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col20a1Q923P0 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Col20a1Q923P0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col20a1Q923P0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col20a1Q923P0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Col20a1Q923P0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col20a1Q923P0 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col20a1Q923P0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col20a1Q923P0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col20a1Q923P0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col20a1Q923P0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Col20a1Q923P0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col20a1Q923P0 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col20a1Q923P0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col20a1Q923P0 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.85■□□□□ 0.61
Col20a1Q923P0 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Col20a1Q923P0 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col20a1Q923P0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col20a1Q923P0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col20a1Q923P0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col20a1Q923P0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col20a1Q923P0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col20a1Q923P0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Col20a1Q923P0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col20a1Q923P0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Col20a1Q923P0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col20a1Q923P0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.84■□□□□ 0.61
Col20a1Q923P0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.84■□□□□ 0.61
Col20a1Q923P0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col20a1Q923P0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Col20a1Q923P0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Col20a1Q923P0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col20a1Q923P0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col20a1Q923P0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col20a1Q923P0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col20a1Q923P0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.84■□□□□ 0.61
Col20a1Q923P0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col20a1Q923P0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col20a1Q923P0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col20a1Q923P0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Col20a1Q923P0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Col20a1Q923P0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col20a1Q923P0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col20a1Q923P0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col20a1Q923P0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Col20a1Q923P0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col20a1Q923P0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col20a1Q923P0 Gm11764-201ENSMUST00000120221 623 ntBASIC18.83■□□□□ 0.61
Col20a1Q923P0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Col20a1Q923P0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col20a1Q923P0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.83■□□□□ 0.61
Col20a1Q923P0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.83■□□□□ 0.61
Col20a1Q923P0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Col20a1Q923P0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.83■□□□□ 0.61
Col20a1Q923P0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.83■□□□□ 0.61
Col20a1Q923P0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Col20a1Q923P0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col20a1Q923P0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Col20a1Q923P0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col20a1Q923P0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Col20a1Q923P0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Col20a1Q923P0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col20a1Q923P0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Col20a1Q923P0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col20a1Q923P0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col20a1Q923P0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.82■□□□□ 0.6
Col20a1Q923P0 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.82■□□□□ 0.6
Col20a1Q923P0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col20a1Q923P0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col20a1Q923P0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.82■□□□□ 0.6
Col20a1Q923P0 Gm27628-201ENSMUST00000184911 107 ntBASIC18.82■□□□□ 0.6
Col20a1Q923P0 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.82■□□□□ 0.6
Col20a1Q923P0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col20a1Q923P0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col20a1Q923P0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col20a1Q923P0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col20a1Q923P0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col20a1Q923P0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col20a1Q923P0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col20a1Q923P0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Col20a1Q923P0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col20a1Q923P0 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col20a1Q923P0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Col20a1Q923P0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col20a1Q923P0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col20a1Q923P0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col20a1Q923P0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col20a1Q923P0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col20a1Q923P0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms