Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc1bQ920F6 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc1bQ920F6 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.42■□□□□ 0.54
Smc1bQ920F6 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.42■□□□□ 0.54
Smc1bQ920F6 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc1bQ920F6 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc1bQ920F6 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc1bQ920F6 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Smc1bQ920F6 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc1bQ920F6 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc1bQ920F6 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smc1bQ920F6 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc1bQ920F6 Gm23935-201ENSMUST00000102303 57 ntBASIC18.42■□□□□ 0.54
Smc1bQ920F6 Gm24270-201ENSMUST00000102326 57 ntBASIC18.42■□□□□ 0.54
Smc1bQ920F6 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.42■□□□□ 0.54
Smc1bQ920F6 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.42■□□□□ 0.54
Smc1bQ920F6 Gm24245-201ENSMUST00000157318 57 ntBASIC18.42■□□□□ 0.54
Smc1bQ920F6 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.42■□□□□ 0.54
Smc1bQ920F6 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.42■□□□□ 0.54
Smc1bQ920F6 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.42■□□□□ 0.54
Smc1bQ920F6 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc1bQ920F6 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc1bQ920F6 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc1bQ920F6 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Smc1bQ920F6 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc1bQ920F6 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc1bQ920F6 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc1bQ920F6 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smc1bQ920F6 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc1bQ920F6 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc1bQ920F6 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc1bQ920F6 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Smc1bQ920F6 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smc1bQ920F6 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smc1bQ920F6 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc1bQ920F6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc1bQ920F6 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smc1bQ920F6 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smc1bQ920F6 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smc1bQ920F6 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.41■□□□□ 0.54
Smc1bQ920F6 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.41■□□□□ 0.54
Smc1bQ920F6 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc1bQ920F6 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.41■□□□□ 0.54
Smc1bQ920F6 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.41■□□□□ 0.54
Smc1bQ920F6 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc1bQ920F6 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Smc1bQ920F6 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc1bQ920F6 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.41■□□□□ 0.54
Smc1bQ920F6 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc1bQ920F6 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc1bQ920F6 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Smc1bQ920F6 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc1bQ920F6 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
Smc1bQ920F6 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Smc1bQ920F6 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Smc1bQ920F6 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc1bQ920F6 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc1bQ920F6 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.4■□□□□ 0.54
Smc1bQ920F6 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc1bQ920F6 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc1bQ920F6 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc1bQ920F6 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Smc1bQ920F6 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc1bQ920F6 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.4■□□□□ 0.54
Smc1bQ920F6 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc1bQ920F6 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc1bQ920F6 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.4■□□□□ 0.54
Smc1bQ920F6 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.4■□□□□ 0.54
Smc1bQ920F6 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Smc1bQ920F6 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smc1bQ920F6 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smc1bQ920F6 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc1bQ920F6 Gm18421-201ENSMUST00000204122 625 ntBASIC18.4■□□□□ 0.54
Smc1bQ920F6 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smc1bQ920F6 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.4■□□□□ 0.54
Smc1bQ920F6 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.4■□□□□ 0.54
Smc1bQ920F6 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc1bQ920F6 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc1bQ920F6 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc1bQ920F6 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc1bQ920F6 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc1bQ920F6 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smc1bQ920F6 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Smc1bQ920F6 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc1bQ920F6 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc1bQ920F6 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Smc1bQ920F6 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.39■□□□□ 0.54
Smc1bQ920F6 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smc1bQ920F6 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc1bQ920F6 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc1bQ920F6 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc1bQ920F6 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc1bQ920F6 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc1bQ920F6 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.39■□□□□ 0.53
Smc1bQ920F6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.39■□□□□ 0.53
Smc1bQ920F6 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Smc1bQ920F6 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.39■□□□□ 0.53
Smc1bQ920F6 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.39■□□□□ 0.53
Smc1bQ920F6 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc1bQ920F6 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms