Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm17790-201ENSMUST00000191545 1228 ntBASIC15.5■□□□□ 0.07
Pcdhb20Q91XZ9 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb20Q91XZ9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.5■□□□□ 0.07
Pcdhb20Q91XZ9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Pcdhb20Q91XZ9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb20Q91XZ9 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Pcdhb20Q91XZ9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb20Q91XZ9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb20Q91XZ9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb20Q91XZ9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Pcdhb20Q91XZ9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhb20Q91XZ9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb20Q91XZ9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb20Q91XZ9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhb20Q91XZ9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb20Q91XZ9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb20Q91XZ9 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb20Q91XZ9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb20Q91XZ9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdhb20Q91XZ9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Pcdhb20Q91XZ9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhb20Q91XZ9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb20Q91XZ9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb20Q91XZ9 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb20Q91XZ9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb20Q91XZ9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb20Q91XZ9 Gm13183-201ENSMUST00000118615 789 ntBASIC15.49■□□□□ 0.07
Pcdhb20Q91XZ9 Gm12644-201ENSMUST00000119935 606 ntBASIC15.49■□□□□ 0.07
Pcdhb20Q91XZ9 Gm43347-201ENSMUST00000200226 580 ntBASIC15.49■□□□□ 0.07
Pcdhb20Q91XZ9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdhb20Q91XZ9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdhb20Q91XZ9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.49■□□□□ 0.07
Pcdhb20Q91XZ9 AC129597.1-201ENSMUST00000223046 1234 ntBASIC15.49■□□□□ 0.07
Pcdhb20Q91XZ9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb20Q91XZ9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb20Q91XZ9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb20Q91XZ9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb20Q91XZ9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhb20Q91XZ9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb20Q91XZ9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Gm37017-201ENSMUST00000195266 747 ntBASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Gm43316-201ENSMUST00000197252 1295 ntBASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb20Q91XZ9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb20Q91XZ9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Pcdhb20Q91XZ9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb20Q91XZ9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb20Q91XZ9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb20Q91XZ9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb20Q91XZ9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb20Q91XZ9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb20Q91XZ9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb20Q91XZ9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb20Q91XZ9 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.47■□□□□ 0.07
Pcdhb20Q91XZ9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.47■□□□□ 0.07
Pcdhb20Q91XZ9 Gm27459-201ENSMUST00000184860 107 ntBASIC15.47■□□□□ 0.07
Pcdhb20Q91XZ9 Gm44683-201ENSMUST00000209088 484 ntBASIC15.47■□□□□ 0.07
Pcdhb20Q91XZ9 Prl7a1-203ENSMUST00000224852 1283 ntBASIC15.47■□□□□ 0.07
Pcdhb20Q91XZ9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb20Q91XZ9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb20Q91XZ9 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb20Q91XZ9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
Pcdhb20Q91XZ9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb20Q91XZ9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb20Q91XZ9 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhb20Q91XZ9 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb20Q91XZ9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhb20Q91XZ9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb20Q91XZ9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb20Q91XZ9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms