Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb4Q91XZ6 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb4Q91XZ6 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
Pcdhb4Q91XZ6 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb4Q91XZ6 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhb4Q91XZ6 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb4Q91XZ6 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb4Q91XZ6 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb4Q91XZ6 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb4Q91XZ6 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb4Q91XZ6 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb4Q91XZ6 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb4Q91XZ6 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhb4Q91XZ6 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 Gm27389-201ENSMUST00000183622 195 ntBASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
Pcdhb4Q91XZ6 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb4Q91XZ6 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb4Q91XZ6 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.91■□□□□ 0.14
Pcdhb4Q91XZ6 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb4Q91XZ6 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb4Q91XZ6 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Pcdhb4Q91XZ6 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.91■□□□□ 0.14
Pcdhb4Q91XZ6 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb4Q91XZ6 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb4Q91XZ6 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb4Q91XZ6 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.91■□□□□ 0.14
Pcdhb4Q91XZ6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb4Q91XZ6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb4Q91XZ6 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb4Q91XZ6 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.91■□□□□ 0.14
Pcdhb4Q91XZ6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb4Q91XZ6 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb4Q91XZ6 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb4Q91XZ6 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb4Q91XZ6 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb4Q91XZ6 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb4Q91XZ6 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb4Q91XZ6 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.91■□□□□ 0.14
Pcdhb4Q91XZ6 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.91■□□□□ 0.14
Pcdhb4Q91XZ6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb4Q91XZ6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 Gm22697-201ENSMUST00000175194 63 ntBASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 Gm21559-201ENSMUST00000220638 855 ntBASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 Gm8587-201ENSMUST00000076538 843 ntBASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms