Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga4Q91XY4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga4Q91XY4 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga4Q91XY4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdhga4Q91XY4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga4Q91XY4 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga4Q91XY4 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga4Q91XY4 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga4Q91XY4 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga4Q91XY4 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.79■□□□□ 0.12
Pcdhga4Q91XY4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdhga4Q91XY4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga4Q91XY4 Gm10052-201ENSMUST00000168019 960 ntBASIC15.79■□□□□ 0.12
Pcdhga4Q91XY4 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.79■□□□□ 0.12
Pcdhga4Q91XY4 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga4Q91XY4 Gm7729-201ENSMUST00000050143 801 ntBASIC15.79■□□□□ 0.12
Pcdhga4Q91XY4 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga4Q91XY4 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga4Q91XY4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga4Q91XY4 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga4Q91XY4 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhga4Q91XY4 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga4Q91XY4 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga4Q91XY4 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.78■□□□□ 0.12
Pcdhga4Q91XY4 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga4Q91XY4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga4Q91XY4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga4Q91XY4 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga4Q91XY4 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga4Q91XY4 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga4Q91XY4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhga4Q91XY4 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhga4Q91XY4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga4Q91XY4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga4Q91XY4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga4Q91XY4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga4Q91XY4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga4Q91XY4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Pcdhga4Q91XY4 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga4Q91XY4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga4Q91XY4 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga4Q91XY4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhga4Q91XY4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga4Q91XY4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga4Q91XY4 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga4Q91XY4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga4Q91XY4 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga4Q91XY4 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga4Q91XY4 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Pcdhga4Q91XY4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Pcdhga4Q91XY4 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga4Q91XY4 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga4Q91XY4 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga4Q91XY4 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.77■□□□□ 0.12
Pcdhga4Q91XY4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga4Q91XY4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga4Q91XY4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga4Q91XY4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.77■□□□□ 0.12
Pcdhga4Q91XY4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Pcdhga4Q91XY4 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga4Q91XY4 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga4Q91XY4 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga4Q91XY4 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Pcdhga4Q91XY4 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Pcdhga4Q91XY4 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga4Q91XY4 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga4Q91XY4 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Pcdhga4Q91XY4 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga4Q91XY4 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga4Q91XY4 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga4Q91XY4 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga4Q91XY4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga4Q91XY4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga4Q91XY4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga4Q91XY4 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga4Q91XY4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga4Q91XY4 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga4Q91XY4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga4Q91XY4 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga4Q91XY4 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga4Q91XY4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga4Q91XY4 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhga4Q91XY4 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga4Q91XY4 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga4Q91XY4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga4Q91XY4 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga4Q91XY4 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga4Q91XY4 Gm15794-201ENSMUST00000120182 631 ntBASIC15.76■□□□□ 0.11
Pcdhga4Q91XY4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.76■□□□□ 0.11
Pcdhga4Q91XY4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga4Q91XY4 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga4Q91XY4 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdhga4Q91XY4 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga4Q91XY4 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga4Q91XY4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga4Q91XY4 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Pcdhga4Q91XY4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga4Q91XY4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga4Q91XY4 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdhga4Q91XY4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms