Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhgb4Q91XX6 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Gm10052-201ENSMUST00000168019 960 ntBASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Gm6623-201ENSMUST00000173570 544 ntBASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Gm44711-201ENSMUST00000205414 1264 ntBASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Gm7729-201ENSMUST00000050143 801 ntBASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhgb4Q91XX6 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Pcdhgb4Q91XX6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgb4Q91XX6 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgb4Q91XX6 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgb4Q91XX6 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
Pcdhgb4Q91XX6 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgb4Q91XX6 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgb4Q91XX6 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgb4Q91XX6 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Pcdhgb4Q91XX6 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Pcdhgb4Q91XX6 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgb4Q91XX6 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.96■□□□□ 0.31
Pcdhgb4Q91XX6 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.96■□□□□ 0.31
Pcdhgb4Q91XX6 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Pcdhgb4Q91XX6 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgb4Q91XX6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgb4Q91XX6 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgb4Q91XX6 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.96■□□□□ 0.31
Pcdhgb4Q91XX6 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgb4Q91XX6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.96■□□□□ 0.31
Pcdhgb4Q91XX6 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgb4Q91XX6 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgb4Q91XX6 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgb4Q91XX6 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgb4Q91XX6 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgb4Q91XX6 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgb4Q91XX6 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhgb4Q91XX6 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhgb4Q91XX6 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhgb4Q91XX6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Pcdhgb4Q91XX6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhgb4Q91XX6 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
Pcdhgb4Q91XX6 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhgb4Q91XX6 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhgb4Q91XX6 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Pcdhgb4Q91XX6 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhgb4Q91XX6 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb4Q91XX6 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb4Q91XX6 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhgb4Q91XX6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms