Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx41Q91VN6 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx41Q91VN6 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx41Q91VN6 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx41Q91VN6 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx41Q91VN6 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.33■□□□□ 0.53
Ddx41Q91VN6 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Ddx41Q91VN6 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC18.33■□□□□ 0.53
Ddx41Q91VN6 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx41Q91VN6 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx41Q91VN6 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Ddx41Q91VN6 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx41Q91VN6 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx41Q91VN6 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Ddx41Q91VN6 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx41Q91VN6 Gm12644-201ENSMUST00000119935 606 ntBASIC18.33■□□□□ 0.52
Ddx41Q91VN6 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.33■□□□□ 0.52
Ddx41Q91VN6 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx41Q91VN6 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx41Q91VN6 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.33■□□□□ 0.52
Ddx41Q91VN6 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx41Q91VN6 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx41Q91VN6 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx41Q91VN6 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.33■□□□□ 0.52
Ddx41Q91VN6 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx41Q91VN6 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx41Q91VN6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx41Q91VN6 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx41Q91VN6 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx41Q91VN6 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx41Q91VN6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Ddx41Q91VN6 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Ddx41Q91VN6 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx41Q91VN6 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx41Q91VN6 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx41Q91VN6 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx41Q91VN6 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.32■□□□□ 0.52
Ddx41Q91VN6 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx41Q91VN6 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx41Q91VN6 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.32■□□□□ 0.52
Ddx41Q91VN6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx41Q91VN6 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.32■□□□□ 0.52
Ddx41Q91VN6 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx41Q91VN6 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx41Q91VN6 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx41Q91VN6 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx41Q91VN6 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx41Q91VN6 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx41Q91VN6 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Ddx41Q91VN6 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx41Q91VN6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Ddx41Q91VN6 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx41Q91VN6 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx41Q91VN6 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Ddx41Q91VN6 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx41Q91VN6 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx41Q91VN6 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Ddx41Q91VN6 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx41Q91VN6 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.31■□□□□ 0.52
Ddx41Q91VN6 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx41Q91VN6 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.31■□□□□ 0.52
Ddx41Q91VN6 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx41Q91VN6 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx41Q91VN6 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Ddx41Q91VN6 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.31■□□□□ 0.52
Ddx41Q91VN6 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Ddx41Q91VN6 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Ddx41Q91VN6 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx41Q91VN6 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx41Q91VN6 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx41Q91VN6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx41Q91VN6 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx41Q91VN6 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx41Q91VN6 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx41Q91VN6 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx41Q91VN6 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx41Q91VN6 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx41Q91VN6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx41Q91VN6 Gm11452-201ENSMUST00000122376 690 ntBASIC18.3■□□□□ 0.52
Ddx41Q91VN6 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx41Q91VN6 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.3■□□□□ 0.52
Ddx41Q91VN6 Gm44454-201ENSMUST00000198541 138 ntBASIC18.3■□□□□ 0.52
Ddx41Q91VN6 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx41Q91VN6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx41Q91VN6 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx41Q91VN6 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx41Q91VN6 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx41Q91VN6 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ddx41Q91VN6 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx41Q91VN6 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx41Q91VN6 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx41Q91VN6 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx41Q91VN6 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ddx41Q91VN6 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx41Q91VN6 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Ddx41Q91VN6 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.29■□□□□ 0.52
Ddx41Q91VN6 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx41Q91VN6 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx41Q91VN6 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx41Q91VN6 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms