Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab40cQ8VHQ4 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 Gm38027-201ENSMUST00000192315 235 ntBASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rab40cQ8VHQ4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab40cQ8VHQ4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.1□□□□□ -0.31
Rab40cQ8VHQ4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rab40cQ8VHQ4 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab40cQ8VHQ4 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab40cQ8VHQ4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.1□□□□□ -0.31
Rab40cQ8VHQ4 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rab40cQ8VHQ4 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.1□□□□□ -0.31
Rab40cQ8VHQ4 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rab40cQ8VHQ4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Rab40cQ8VHQ4 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.1□□□□□ -0.31
Rab40cQ8VHQ4 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.1□□□□□ -0.31
Rab40cQ8VHQ4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.1□□□□□ -0.31
Rab40cQ8VHQ4 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab40cQ8VHQ4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.1□□□□□ -0.31
Rab40cQ8VHQ4 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab40cQ8VHQ4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab40cQ8VHQ4 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Rab40cQ8VHQ4 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab40cQ8VHQ4 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.1□□□□□ -0.31
Rab40cQ8VHQ4 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab40cQ8VHQ4 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rab40cQ8VHQ4 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab40cQ8VHQ4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab40cQ8VHQ4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rab40cQ8VHQ4 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab40cQ8VHQ4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab40cQ8VHQ4 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Gm12085-201ENSMUST00000119263 940 ntBASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Gm20760-201ENSMUST00000179197 648 ntBASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms