Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpa1Q8VEE4 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpa1Q8VEE4 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rpa1Q8VEE4 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpa1Q8VEE4 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpa1Q8VEE4 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpa1Q8VEE4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpa1Q8VEE4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpa1Q8VEE4 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Rpa1Q8VEE4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rpa1Q8VEE4 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpa1Q8VEE4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Rpa1Q8VEE4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpa1Q8VEE4 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Rpa1Q8VEE4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rpa1Q8VEE4 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpa1Q8VEE4 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rpa1Q8VEE4 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Rpa1Q8VEE4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rpa1Q8VEE4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.16■□□□□ 0.18
Rpa1Q8VEE4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rpa1Q8VEE4 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.16■□□□□ 0.18
Rpa1Q8VEE4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rpa1Q8VEE4 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.16■□□□□ 0.18
Rpa1Q8VEE4 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rpa1Q8VEE4 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rpa1Q8VEE4 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rpa1Q8VEE4 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rpa1Q8VEE4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Rpa1Q8VEE4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rpa1Q8VEE4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.16■□□□□ 0.18
Rpa1Q8VEE4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.16■□□□□ 0.18
Rpa1Q8VEE4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.16■□□□□ 0.18
Rpa1Q8VEE4 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Rpa1Q8VEE4 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rpa1Q8VEE4 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rpa1Q8VEE4 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rpa1Q8VEE4 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpa1Q8VEE4 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rpa1Q8VEE4 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpa1Q8VEE4 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rpa1Q8VEE4 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.15■□□□□ 0.18
Rpa1Q8VEE4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpa1Q8VEE4 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpa1Q8VEE4 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpa1Q8VEE4 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpa1Q8VEE4 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Rpa1Q8VEE4 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpa1Q8VEE4 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rpa1Q8VEE4 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rpa1Q8VEE4 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.15■□□□□ 0.18
Rpa1Q8VEE4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpa1Q8VEE4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.15■□□□□ 0.18
Rpa1Q8VEE4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpa1Q8VEE4 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpa1Q8VEE4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpa1Q8VEE4 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpa1Q8VEE4 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rpa1Q8VEE4 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpa1Q8VEE4 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rpa1Q8VEE4 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rpa1Q8VEE4 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 Gm38027-201ENSMUST00000192315 235 ntBASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpa1Q8VEE4 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa1Q8VEE4 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Rpa1Q8VEE4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa1Q8VEE4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa1Q8VEE4 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Rpa1Q8VEE4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa1Q8VEE4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa1Q8VEE4 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms