Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 Gm18489-201ENSMUST00000172565 551 ntBASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 Gm5866-201ENSMUST00000177881 973 ntBASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 Gm5177-201ENSMUST00000183092 997 ntBASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 Gm27622-201ENSMUST00000183779 60 ntBASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lmcd1Q8VEE1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lmcd1Q8VEE1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lmcd1Q8VEE1 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lmcd1Q8VEE1 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lmcd1Q8VEE1 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.01■□□□□ 0.31
Lmcd1Q8VEE1 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC17.01■□□□□ 0.31
Lmcd1Q8VEE1 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.01■□□□□ 0.31
Lmcd1Q8VEE1 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Lmcd1Q8VEE1 Gm9682-201ENSMUST00000197505 556 ntBASIC17.01■□□□□ 0.31
Lmcd1Q8VEE1 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.01■□□□□ 0.31
Lmcd1Q8VEE1 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lmcd1Q8VEE1 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Lmcd1Q8VEE1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Lmcd1Q8VEE1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lmcd1Q8VEE1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lmcd1Q8VEE1 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lmcd1Q8VEE1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lmcd1Q8VEE1 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lmcd1Q8VEE1 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lmcd1Q8VEE1 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lmcd1Q8VEE1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lmcd1Q8VEE1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17■□□□□ 0.31
Lmcd1Q8VEE1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17■□□□□ 0.31
Lmcd1Q8VEE1 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17■□□□□ 0.31
Lmcd1Q8VEE1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Lmcd1Q8VEE1 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lmcd1Q8VEE1 Gm6226-201ENSMUST00000117765 1146 ntBASIC17■□□□□ 0.31
Lmcd1Q8VEE1 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17■□□□□ 0.31
Lmcd1Q8VEE1 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17■□□□□ 0.31
Lmcd1Q8VEE1 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17■□□□□ 0.31
Lmcd1Q8VEE1 Gm43125-201ENSMUST00000201724 730 ntBASIC17■□□□□ 0.31
Lmcd1Q8VEE1 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17■□□□□ 0.31
Lmcd1Q8VEE1 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Lmcd1Q8VEE1 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17■□□□□ 0.31
Lmcd1Q8VEE1 AC125206.2-201ENSMUST00000217454 574 ntBASIC17■□□□□ 0.31
Lmcd1Q8VEE1 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17■□□□□ 0.31
Lmcd1Q8VEE1 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lmcd1Q8VEE1 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lmcd1Q8VEE1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Lmcd1Q8VEE1 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lmcd1Q8VEE1 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17■□□□□ 0.31
Lmcd1Q8VEE1 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17■□□□□ 0.31
Lmcd1Q8VEE1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17■□□□□ 0.31
Lmcd1Q8VEE1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Lmcd1Q8VEE1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17■□□□□ 0.31
Lmcd1Q8VEE1 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lmcd1Q8VEE1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lmcd1Q8VEE1 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Lmcd1Q8VEE1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Lmcd1Q8VEE1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Lmcd1Q8VEE1 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Lmcd1Q8VEE1 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lmcd1Q8VEE1 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lmcd1Q8VEE1 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Lmcd1Q8VEE1 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.99■□□□□ 0.31
Lmcd1Q8VEE1 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.99■□□□□ 0.31
Lmcd1Q8VEE1 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.99■□□□□ 0.31
Lmcd1Q8VEE1 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.99■□□□□ 0.31
Lmcd1Q8VEE1 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.99■□□□□ 0.31
Lmcd1Q8VEE1 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lmcd1Q8VEE1 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Lmcd1Q8VEE1 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Lmcd1Q8VEE1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Lmcd1Q8VEE1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.99■□□□□ 0.31
Lmcd1Q8VEE1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.99■□□□□ 0.31
Lmcd1Q8VEE1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lmcd1Q8VEE1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lmcd1Q8VEE1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lmcd1Q8VEE1 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lmcd1Q8VEE1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lmcd1Q8VEE1 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
Lmcd1Q8VEE1 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Lmcd1Q8VEE1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lmcd1Q8VEE1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Lmcd1Q8VEE1 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.98■□□□□ 0.31
Lmcd1Q8VEE1 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Lmcd1Q8VEE1 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.98■□□□□ 0.31
Lmcd1Q8VEE1 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.98■□□□□ 0.31
Lmcd1Q8VEE1 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lmcd1Q8VEE1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lmcd1Q8VEE1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lmcd1Q8VEE1 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lmcd1Q8VEE1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms