Protein–RNA interactions for Protein: Q8VE99

Ccdc115, Coiled-coil domain-containing protein 115, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc115Q8VE99 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc115Q8VE99 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc115Q8VE99 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc115Q8VE99 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc115Q8VE99 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.06□□□□□ -0.16
Ccdc115Q8VE99 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc115Q8VE99 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc115Q8VE99 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc115Q8VE99 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc115Q8VE99 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc115Q8VE99 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc115Q8VE99 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc115Q8VE99 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc115Q8VE99 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc115Q8VE99 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc115Q8VE99 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc115Q8VE99 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc115Q8VE99 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc115Q8VE99 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc115Q8VE99 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc115Q8VE99 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc115Q8VE99 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc115Q8VE99 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.05□□□□□ -0.16
Ccdc115Q8VE99 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.05□□□□□ -0.16
Ccdc115Q8VE99 Gm21814-202ENSMUST00000203277 873 ntBASIC14.05□□□□□ -0.16
Ccdc115Q8VE99 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc115Q8VE99 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc115Q8VE99 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc115Q8VE99 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc115Q8VE99 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc115Q8VE99 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc115Q8VE99 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.05□□□□□ -0.16
Ccdc115Q8VE99 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ccdc115Q8VE99 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc115Q8VE99 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc115Q8VE99 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc115Q8VE99 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.04□□□□□ -0.16
Ccdc115Q8VE99 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc115Q8VE99 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc115Q8VE99 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc115Q8VE99 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc115Q8VE99 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc115Q8VE99 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc115Q8VE99 Gm27011-201ENSMUST00000182352 972 ntBASIC14.04□□□□□ -0.16
Ccdc115Q8VE99 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc115Q8VE99 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.04□□□□□ -0.16
Ccdc115Q8VE99 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.04□□□□□ -0.16
Ccdc115Q8VE99 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc115Q8VE99 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc115Q8VE99 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc115Q8VE99 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc115Q8VE99 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc115Q8VE99 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc115Q8VE99 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc115Q8VE99 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc115Q8VE99 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc115Q8VE99 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc115Q8VE99 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc115Q8VE99 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc115Q8VE99 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc115Q8VE99 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc115Q8VE99 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc115Q8VE99 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc115Q8VE99 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccdc115Q8VE99 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc115Q8VE99 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc115Q8VE99 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc115Q8VE99 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ccdc115Q8VE99 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccdc115Q8VE99 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.03□□□□□ -0.16
Ccdc115Q8VE99 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ccdc115Q8VE99 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc115Q8VE99 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc115Q8VE99 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc115Q8VE99 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc115Q8VE99 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc115Q8VE99 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc115Q8VE99 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc115Q8VE99 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc115Q8VE99 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc115Q8VE99 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc115Q8VE99 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc115Q8VE99 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccdc115Q8VE99 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc115Q8VE99 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc115Q8VE99 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc115Q8VE99 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc115Q8VE99 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.02□□□□□ -0.16
Ccdc115Q8VE99 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.02□□□□□ -0.16
Ccdc115Q8VE99 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Ccdc115Q8VE99 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc115Q8VE99 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ccdc115Q8VE99 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc115Q8VE99 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc115Q8VE99 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc115Q8VE99 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc115Q8VE99 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Ccdc115Q8VE99 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Ccdc115Q8VE99 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc115Q8VE99 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms