Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.47■□□□□ 0.07
Rnf8Q8VC56 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf8Q8VC56 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.47■□□□□ 0.07
Rnf8Q8VC56 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.47■□□□□ 0.07
Rnf8Q8VC56 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf8Q8VC56 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf8Q8VC56 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf8Q8VC56 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf8Q8VC56 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf8Q8VC56 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf8Q8VC56 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf8Q8VC56 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf8Q8VC56 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf8Q8VC56 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Rnf8Q8VC56 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf8Q8VC56 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Rnf8Q8VC56 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Rnf8Q8VC56 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf8Q8VC56 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf8Q8VC56 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf8Q8VC56 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Rnf8Q8VC56 Gm25016-201ENSMUST00000158399 131 ntBASIC15.46■□□□□ 0.07
Rnf8Q8VC56 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf8Q8VC56 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.46■□□□□ 0.07
Rnf8Q8VC56 Gm21559-201ENSMUST00000220638 855 ntBASIC15.46■□□□□ 0.07
Rnf8Q8VC56 Gm8587-201ENSMUST00000076538 843 ntBASIC15.46■□□□□ 0.07
Rnf8Q8VC56 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf8Q8VC56 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf8Q8VC56 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf8Q8VC56 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
Rnf8Q8VC56 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf8Q8VC56 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf8Q8VC56 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf8Q8VC56 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Rnf8Q8VC56 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rnf8Q8VC56 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rnf8Q8VC56 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rnf8Q8VC56 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rnf8Q8VC56 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf8Q8VC56 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf8Q8VC56 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf8Q8VC56 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf8Q8VC56 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf8Q8VC56 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Rnf8Q8VC56 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf8Q8VC56 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Rnf8Q8VC56 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf8Q8VC56 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf8Q8VC56 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf8Q8VC56 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf8Q8VC56 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.45■□□□□ 0.06
Rnf8Q8VC56 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.45■□□□□ 0.06
Rnf8Q8VC56 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf8Q8VC56 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.45■□□□□ 0.06
Rnf8Q8VC56 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf8Q8VC56 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf8Q8VC56 Gm10566-201ENSMUST00000086739 996 ntBASIC15.45■□□□□ 0.06
Rnf8Q8VC56 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Rnf8Q8VC56 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.45■□□□□ 0.06
Rnf8Q8VC56 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Rnf8Q8VC56 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf8Q8VC56 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf8Q8VC56 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf8Q8VC56 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf8Q8VC56 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.45■□□□□ 0.06
Rnf8Q8VC56 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf8Q8VC56 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf8Q8VC56 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf8Q8VC56 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Rnf8Q8VC56 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf8Q8VC56 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf8Q8VC56 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf8Q8VC56 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf8Q8VC56 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf8Q8VC56 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf8Q8VC56 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf8Q8VC56 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Rnf8Q8VC56 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf8Q8VC56 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf8Q8VC56 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.44■□□□□ 0.06
Rnf8Q8VC56 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Rnf8Q8VC56 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf8Q8VC56 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf8Q8VC56 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf8Q8VC56 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.44■□□□□ 0.06
Rnf8Q8VC56 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.44■□□□□ 0.06
Rnf8Q8VC56 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf8Q8VC56 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Rnf8Q8VC56 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf8Q8VC56 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf8Q8VC56 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf8Q8VC56 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf8Q8VC56 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf8Q8VC56 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf8Q8VC56 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf8Q8VC56 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf8Q8VC56 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Rnf8Q8VC56 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Rnf8Q8VC56 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf8Q8VC56 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms