Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Rpap2Q8VC34 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rpap2Q8VC34 Gm15372-201ENSMUST00000120729 834 ntBASIC17.57■□□□□ 0.4
Rpap2Q8VC34 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Rpap2Q8VC34 Gm17807-201ENSMUST00000186869 298 ntBASIC17.57■□□□□ 0.4
Rpap2Q8VC34 Gm21362-201ENSMUST00000194272 928 ntBASIC17.57■□□□□ 0.4
Rpap2Q8VC34 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rpap2Q8VC34 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.57■□□□□ 0.4
Rpap2Q8VC34 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.57■□□□□ 0.4
Rpap2Q8VC34 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.57■□□□□ 0.4
Rpap2Q8VC34 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rpap2Q8VC34 Gm7367-201ENSMUST00000057611 492 ntBASIC17.57■□□□□ 0.4
Rpap2Q8VC34 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rpap2Q8VC34 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rpap2Q8VC34 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Rpap2Q8VC34 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rpap2Q8VC34 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rpap2Q8VC34 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rpap2Q8VC34 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rpap2Q8VC34 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rpap2Q8VC34 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rpap2Q8VC34 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpap2Q8VC34 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpap2Q8VC34 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rpap2Q8VC34 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rpap2Q8VC34 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpap2Q8VC34 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpap2Q8VC34 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpap2Q8VC34 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Rpap2Q8VC34 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rpap2Q8VC34 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpap2Q8VC34 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rpap2Q8VC34 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rpap2Q8VC34 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.56■□□□□ 0.4
Rpap2Q8VC34 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.56■□□□□ 0.4
Rpap2Q8VC34 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpap2Q8VC34 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpap2Q8VC34 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpap2Q8VC34 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rpap2Q8VC34 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rpap2Q8VC34 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rpap2Q8VC34 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpap2Q8VC34 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpap2Q8VC34 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpap2Q8VC34 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpap2Q8VC34 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpap2Q8VC34 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Rpap2Q8VC34 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rpap2Q8VC34 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.55■□□□□ 0.4
Rpap2Q8VC34 Gm25406-201ENSMUST00000157599 105 ntBASIC17.55■□□□□ 0.4
Rpap2Q8VC34 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.55■□□□□ 0.4
Rpap2Q8VC34 Ank2-226ENSMUST00000189368 339 ntBASIC17.55■□□□□ 0.4
Rpap2Q8VC34 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpap2Q8VC34 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpap2Q8VC34 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpap2Q8VC34 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpap2Q8VC34 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rpap2Q8VC34 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpap2Q8VC34 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpap2Q8VC34 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Rpap2Q8VC34 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Rpap2Q8VC34 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rpap2Q8VC34 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpap2Q8VC34 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rpap2Q8VC34 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpap2Q8VC34 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpap2Q8VC34 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpap2Q8VC34 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.54■□□□□ 0.4
Rpap2Q8VC34 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpap2Q8VC34 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.54■□□□□ 0.4
Rpap2Q8VC34 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpap2Q8VC34 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpap2Q8VC34 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Rpap2Q8VC34 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpap2Q8VC34 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpap2Q8VC34 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpap2Q8VC34 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpap2Q8VC34 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpap2Q8VC34 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpap2Q8VC34 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpap2Q8VC34 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rpap2Q8VC34 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpap2Q8VC34 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpap2Q8VC34 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpap2Q8VC34 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpap2Q8VC34 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.53■□□□□ 0.4
Rpap2Q8VC34 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Rpap2Q8VC34 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rpap2Q8VC34 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpap2Q8VC34 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpap2Q8VC34 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpap2Q8VC34 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rpap2Q8VC34 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.53■□□□□ 0.4
Rpap2Q8VC34 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rpap2Q8VC34 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpap2Q8VC34 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.53■□□□□ 0.4
Rpap2Q8VC34 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Rpap2Q8VC34 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rpap2Q8VC34 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.53■□□□□ 0.4
Rpap2Q8VC34 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms