Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Top1mtQ8R4U6 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Top1mtQ8R4U6 Mir6404-201ENSMUST00000183699 94 ntBASIC19.16■□□□□ 0.66
Top1mtQ8R4U6 Gm27742-201ENSMUST00000184667 60 ntBASIC19.16■□□□□ 0.66
Top1mtQ8R4U6 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Top1mtQ8R4U6 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Top1mtQ8R4U6 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC19.16■□□□□ 0.66
Top1mtQ8R4U6 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Top1mtQ8R4U6 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Top1mtQ8R4U6 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Top1mtQ8R4U6 AC093043.3-201ENSMUST00000226531 2273 ntBASIC19.16■□□□□ 0.66
Top1mtQ8R4U6 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Top1mtQ8R4U6 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Top1mtQ8R4U6 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Top1mtQ8R4U6 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Top1mtQ8R4U6 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Top1mtQ8R4U6 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Top1mtQ8R4U6 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Top1mtQ8R4U6 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Top1mtQ8R4U6 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Top1mtQ8R4U6 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Top1mtQ8R4U6 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Top1mtQ8R4U6 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Top1mtQ8R4U6 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Top1mtQ8R4U6 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Top1mtQ8R4U6 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Top1mtQ8R4U6 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Top1mtQ8R4U6 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Top1mtQ8R4U6 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Top1mtQ8R4U6 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Top1mtQ8R4U6 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Top1mtQ8R4U6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC19.14■□□□□ 0.66
Top1mtQ8R4U6 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.66
Top1mtQ8R4U6 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Top1mtQ8R4U6 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Top1mtQ8R4U6 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Top1mtQ8R4U6 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Top1mtQ8R4U6 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Top1mtQ8R4U6 Gm13312-201ENSMUST00000119631 718 ntBASIC19.14■□□□□ 0.65
Top1mtQ8R4U6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.14■□□□□ 0.65
Top1mtQ8R4U6 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Top1mtQ8R4U6 Gm27704-201ENSMUST00000185094 107 ntBASIC19.14■□□□□ 0.65
Top1mtQ8R4U6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Top1mtQ8R4U6 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.14■□□□□ 0.65
Top1mtQ8R4U6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Top1mtQ8R4U6 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Top1mtQ8R4U6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Top1mtQ8R4U6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Top1mtQ8R4U6 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.14■□□□□ 0.65
Top1mtQ8R4U6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Top1mtQ8R4U6 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC19.14■□□□□ 0.65
Top1mtQ8R4U6 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Top1mtQ8R4U6 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Top1mtQ8R4U6 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Top1mtQ8R4U6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Top1mtQ8R4U6 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Top1mtQ8R4U6 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Top1mtQ8R4U6 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC19.13■□□□□ 0.65
Top1mtQ8R4U6 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Top1mtQ8R4U6 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Top1mtQ8R4U6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Top1mtQ8R4U6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Top1mtQ8R4U6 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Top1mtQ8R4U6 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Top1mtQ8R4U6 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.13■□□□□ 0.65
Top1mtQ8R4U6 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Top1mtQ8R4U6 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Top1mtQ8R4U6 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Top1mtQ8R4U6 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Top1mtQ8R4U6 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Top1mtQ8R4U6 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Top1mtQ8R4U6 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Top1mtQ8R4U6 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Top1mtQ8R4U6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Top1mtQ8R4U6 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Top1mtQ8R4U6 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Top1mtQ8R4U6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Top1mtQ8R4U6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.12■□□□□ 0.65
Top1mtQ8R4U6 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Top1mtQ8R4U6 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.12■□□□□ 0.65
Top1mtQ8R4U6 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.12■□□□□ 0.65
Top1mtQ8R4U6 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Top1mtQ8R4U6 Gm33142-201ENSMUST00000193913 867 ntBASIC19.12■□□□□ 0.65
Top1mtQ8R4U6 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Top1mtQ8R4U6 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Top1mtQ8R4U6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Top1mtQ8R4U6 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Top1mtQ8R4U6 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Top1mtQ8R4U6 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC19.12■□□□□ 0.65
Top1mtQ8R4U6 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Top1mtQ8R4U6 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Top1mtQ8R4U6 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19.12■□□□□ 0.65
Top1mtQ8R4U6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Top1mtQ8R4U6 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC19.11■□□□□ 0.65
Top1mtQ8R4U6 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Top1mtQ8R4U6 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Top1mtQ8R4U6 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Top1mtQ8R4U6 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Top1mtQ8R4U6 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Top1mtQ8R4U6 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms