Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Zcchc9Q8R1J3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Zcchc9Q8R1J3 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Zcchc9Q8R1J3 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Zcchc9Q8R1J3 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Zcchc9Q8R1J3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Zcchc9Q8R1J3 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Zcchc9Q8R1J3 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Zcchc9Q8R1J3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Zcchc9Q8R1J3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Zcchc9Q8R1J3 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Zcchc9Q8R1J3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Zcchc9Q8R1J3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Zcchc9Q8R1J3 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.95■□□□□ 0.14
Zcchc9Q8R1J3 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Zcchc9Q8R1J3 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.95■□□□□ 0.14
Zcchc9Q8R1J3 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Zcchc9Q8R1J3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Zcchc9Q8R1J3 Gm5364-201ENSMUST00000216789 889 ntBASIC15.95■□□□□ 0.14
Zcchc9Q8R1J3 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Zcchc9Q8R1J3 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.95■□□□□ 0.14
Zcchc9Q8R1J3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Zcchc9Q8R1J3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Zcchc9Q8R1J3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Zcchc9Q8R1J3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Zcchc9Q8R1J3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Zcchc9Q8R1J3 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Zcchc9Q8R1J3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Zcchc9Q8R1J3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Zcchc9Q8R1J3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Zcchc9Q8R1J3 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Zcchc9Q8R1J3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Zcchc9Q8R1J3 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Zcchc9Q8R1J3 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Zcchc9Q8R1J3 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Zcchc9Q8R1J3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Zcchc9Q8R1J3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Zcchc9Q8R1J3 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Zcchc9Q8R1J3 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.94■□□□□ 0.14
Zcchc9Q8R1J3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Zcchc9Q8R1J3 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Zcchc9Q8R1J3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.94■□□□□ 0.14
Zcchc9Q8R1J3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Zcchc9Q8R1J3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Zcchc9Q8R1J3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Zcchc9Q8R1J3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Zcchc9Q8R1J3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Zcchc9Q8R1J3 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Zcchc9Q8R1J3 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Zcchc9Q8R1J3 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Zcchc9Q8R1J3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Zcchc9Q8R1J3 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Zcchc9Q8R1J3 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Zcchc9Q8R1J3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Zcchc9Q8R1J3 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Zcchc9Q8R1J3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Zcchc9Q8R1J3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.93■□□□□ 0.14
Zcchc9Q8R1J3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Zcchc9Q8R1J3 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Zcchc9Q8R1J3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
Zcchc9Q8R1J3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Zcchc9Q8R1J3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
Zcchc9Q8R1J3 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Zcchc9Q8R1J3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Zcchc9Q8R1J3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Zcchc9Q8R1J3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Zcchc9Q8R1J3 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Zcchc9Q8R1J3 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Zcchc9Q8R1J3 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Zcchc9Q8R1J3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Zcchc9Q8R1J3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Zcchc9Q8R1J3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Zcchc9Q8R1J3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Zcchc9Q8R1J3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Zcchc9Q8R1J3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Zcchc9Q8R1J3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Zcchc9Q8R1J3 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Zcchc9Q8R1J3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Zcchc9Q8R1J3 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Zcchc9Q8R1J3 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Zcchc9Q8R1J3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Zcchc9Q8R1J3 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Zcchc9Q8R1J3 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Zcchc9Q8R1J3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
Zcchc9Q8R1J3 Mir5126-201ENSMUST00000175513 77 ntBASIC15.92■□□□□ 0.14
Zcchc9Q8R1J3 Gm7506-201ENSMUST00000207758 815 ntBASIC15.92■□□□□ 0.14
Zcchc9Q8R1J3 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.92■□□□□ 0.14
Zcchc9Q8R1J3 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.92■□□□□ 0.14
Zcchc9Q8R1J3 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.92■□□□□ 0.14
Zcchc9Q8R1J3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
Zcchc9Q8R1J3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.92■□□□□ 0.14
Zcchc9Q8R1J3 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Zcchc9Q8R1J3 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Zcchc9Q8R1J3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Zcchc9Q8R1J3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Zcchc9Q8R1J3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Zcchc9Q8R1J3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Zcchc9Q8R1J3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.92■□□□□ 0.14
Zcchc9Q8R1J3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Zcchc9Q8R1J3 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms