Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rpp40Q8R1F9 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.13■□□□□ 0.33
Rpp40Q8R1F9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpp40Q8R1F9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
Rpp40Q8R1F9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.13■□□□□ 0.33
Rpp40Q8R1F9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpp40Q8R1F9 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.13■□□□□ 0.33
Rpp40Q8R1F9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpp40Q8R1F9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Rpp40Q8R1F9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpp40Q8R1F9 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rpp40Q8R1F9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rpp40Q8R1F9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.13■□□□□ 0.33
Rpp40Q8R1F9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpp40Q8R1F9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpp40Q8R1F9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpp40Q8R1F9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpp40Q8R1F9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpp40Q8R1F9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpp40Q8R1F9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.12■□□□□ 0.33
Rpp40Q8R1F9 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpp40Q8R1F9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpp40Q8R1F9 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.12■□□□□ 0.33
Rpp40Q8R1F9 Gm8097-201ENSMUST00000117903 829 ntBASIC17.12■□□□□ 0.33
Rpp40Q8R1F9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.12■□□□□ 0.33
Rpp40Q8R1F9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rpp40Q8R1F9 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.12■□□□□ 0.33
Rpp40Q8R1F9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.12■□□□□ 0.33
Rpp40Q8R1F9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpp40Q8R1F9 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpp40Q8R1F9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rpp40Q8R1F9 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.12■□□□□ 0.33
Rpp40Q8R1F9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
Rpp40Q8R1F9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpp40Q8R1F9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.12■□□□□ 0.33
Rpp40Q8R1F9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpp40Q8R1F9 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpp40Q8R1F9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpp40Q8R1F9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rpp40Q8R1F9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rpp40Q8R1F9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp40Q8R1F9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp40Q8R1F9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp40Q8R1F9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp40Q8R1F9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp40Q8R1F9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp40Q8R1F9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp40Q8R1F9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rpp40Q8R1F9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.11■□□□□ 0.33
Rpp40Q8R1F9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp40Q8R1F9 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp40Q8R1F9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp40Q8R1F9 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp40Q8R1F9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Rpp40Q8R1F9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp40Q8R1F9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp40Q8R1F9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Rpp40Q8R1F9 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.11■□□□□ 0.33
Rpp40Q8R1F9 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp40Q8R1F9 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.11■□□□□ 0.33
Rpp40Q8R1F9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp40Q8R1F9 Rps4l-201ENSMUST00000071745 943 ntBASIC17.11■□□□□ 0.33
Rpp40Q8R1F9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rpp40Q8R1F9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp40Q8R1F9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp40Q8R1F9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp40Q8R1F9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp40Q8R1F9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp40Q8R1F9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rpp40Q8R1F9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rpp40Q8R1F9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpp40Q8R1F9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpp40Q8R1F9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.1■□□□□ 0.33
Rpp40Q8R1F9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpp40Q8R1F9 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.1■□□□□ 0.33
Rpp40Q8R1F9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.1■□□□□ 0.33
Rpp40Q8R1F9 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.1■□□□□ 0.33
Rpp40Q8R1F9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpp40Q8R1F9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpp40Q8R1F9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpp40Q8R1F9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpp40Q8R1F9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpp40Q8R1F9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpp40Q8R1F9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpp40Q8R1F9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpp40Q8R1F9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rpp40Q8R1F9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rpp40Q8R1F9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.1■□□□□ 0.33
Rpp40Q8R1F9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.1■□□□□ 0.33
Rpp40Q8R1F9 Gm6376-201ENSMUST00000209407 580 ntBASIC17.1■□□□□ 0.33
Rpp40Q8R1F9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rpp40Q8R1F9 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpp40Q8R1F9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpp40Q8R1F9 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.1■□□□□ 0.33
Rpp40Q8R1F9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpp40Q8R1F9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpp40Q8R1F9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpp40Q8R1F9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Rpp40Q8R1F9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms