Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Alms1Q8K4E0 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Alms1Q8K4E0 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.62■□□□□ 0.09
Alms1Q8K4E0 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Alms1Q8K4E0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Alms1Q8K4E0 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Alms1Q8K4E0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Alms1Q8K4E0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Alms1Q8K4E0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Alms1Q8K4E0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Alms1Q8K4E0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Alms1Q8K4E0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.61■□□□□ 0.09
Alms1Q8K4E0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.61■□□□□ 0.09
Alms1Q8K4E0 Gm27300-201ENSMUST00000184085 97 ntBASIC15.61■□□□□ 0.09
Alms1Q8K4E0 Gm27335-201ENSMUST00000184758 97 ntBASIC15.61■□□□□ 0.09
Alms1Q8K4E0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Alms1Q8K4E0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Alms1Q8K4E0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Alms1Q8K4E0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC15.61■□□□□ 0.09
Alms1Q8K4E0 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Alms1Q8K4E0 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Alms1Q8K4E0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Alms1Q8K4E0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Alms1Q8K4E0 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.61■□□□□ 0.09
Alms1Q8K4E0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Alms1Q8K4E0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Alms1Q8K4E0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Alms1Q8K4E0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Alms1Q8K4E0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Alms1Q8K4E0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alms1Q8K4E0 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alms1Q8K4E0 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alms1Q8K4E0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alms1Q8K4E0 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alms1Q8K4E0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Alms1Q8K4E0 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.6■□□□□ 0.09
Alms1Q8K4E0 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Alms1Q8K4E0 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alms1Q8K4E0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alms1Q8K4E0 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.6■□□□□ 0.09
Alms1Q8K4E0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alms1Q8K4E0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alms1Q8K4E0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alms1Q8K4E0 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.6■□□□□ 0.09
Alms1Q8K4E0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alms1Q8K4E0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alms1Q8K4E0 Gm13597-201ENSMUST00000121239 375 ntBASIC15.6■□□□□ 0.09
Alms1Q8K4E0 Gm4899-201ENSMUST00000178708 719 ntBASIC15.6■□□□□ 0.09
Alms1Q8K4E0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.6■□□□□ 0.09
Alms1Q8K4E0 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Alms1Q8K4E0 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.6■□□□□ 0.09
Alms1Q8K4E0 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Alms1Q8K4E0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Alms1Q8K4E0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alms1Q8K4E0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alms1Q8K4E0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Alms1Q8K4E0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alms1Q8K4E0 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.6■□□□□ 0.09
Alms1Q8K4E0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alms1Q8K4E0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Alms1Q8K4E0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Alms1Q8K4E0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Alms1Q8K4E0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Alms1Q8K4E0 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Alms1Q8K4E0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Alms1Q8K4E0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Alms1Q8K4E0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Alms1Q8K4E0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Alms1Q8K4E0 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Alms1Q8K4E0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Alms1Q8K4E0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.59■□□□□ 0.09
Alms1Q8K4E0 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.59■□□□□ 0.09
Alms1Q8K4E0 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Alms1Q8K4E0 Gm8396-201ENSMUST00000057361 823 ntBASIC15.59■□□□□ 0.09
Alms1Q8K4E0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Alms1Q8K4E0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Alms1Q8K4E0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Alms1Q8K4E0 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Alms1Q8K4E0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Alms1Q8K4E0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Alms1Q8K4E0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Alms1Q8K4E0 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.58■□□□□ 0.09
Alms1Q8K4E0 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Alms1Q8K4E0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Alms1Q8K4E0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Alms1Q8K4E0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Alms1Q8K4E0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Alms1Q8K4E0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Alms1Q8K4E0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Alms1Q8K4E0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Alms1Q8K4E0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Alms1Q8K4E0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Alms1Q8K4E0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Alms1Q8K4E0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Alms1Q8K4E0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Alms1Q8K4E0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.58■□□□□ 0.08
Alms1Q8K4E0 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.58■□□□□ 0.08
Alms1Q8K4E0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Alms1Q8K4E0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Alms1Q8K4E0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms