Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Clrn1Q8K445 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clrn1Q8K445 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clrn1Q8K445 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clrn1Q8K445 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clrn1Q8K445 Gm7284-201ENSMUST00000131667 944 ntBASIC15.13■□□□□ 0.01
Clrn1Q8K445 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Clrn1Q8K445 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clrn1Q8K445 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clrn1Q8K445 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Clrn1Q8K445 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
Clrn1Q8K445 Gm27704-201ENSMUST00000185094 107 ntBASIC15.13■□□□□ 0.01
Clrn1Q8K445 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Clrn1Q8K445 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clrn1Q8K445 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clrn1Q8K445 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clrn1Q8K445 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Clrn1Q8K445 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clrn1Q8K445 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Clrn1Q8K445 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Clrn1Q8K445 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clrn1Q8K445 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clrn1Q8K445 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clrn1Q8K445 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn1Q8K445 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Clrn1Q8K445 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn1Q8K445 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Clrn1Q8K445 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn1Q8K445 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn1Q8K445 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn1Q8K445 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn1Q8K445 Gm15794-201ENSMUST00000120182 631 ntBASIC15.12■□□□□ 0.01
Clrn1Q8K445 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.12■□□□□ 0.01
Clrn1Q8K445 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn1Q8K445 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn1Q8K445 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.12■□□□□ 0.01
Clrn1Q8K445 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn1Q8K445 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn1Q8K445 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn1Q8K445 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Clrn1Q8K445 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn1Q8K445 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn1Q8K445 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn1Q8K445 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn1Q8K445 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn1Q8K445 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn1Q8K445 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn1Q8K445 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn1Q8K445 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.12■□□□□ 0.01
Clrn1Q8K445 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn1Q8K445 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.12■□□□□ 0.01
Clrn1Q8K445 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn1Q8K445 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.12■□□□□ 0.01
Clrn1Q8K445 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Clrn1Q8K445 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Clrn1Q8K445 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn1Q8K445 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn1Q8K445 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn1Q8K445 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn1Q8K445 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Clrn1Q8K445 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn1Q8K445 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn1Q8K445 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn1Q8K445 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn1Q8K445 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn1Q8K445 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn1Q8K445 Gm14859-201ENSMUST00000117752 357 ntBASIC15.11■□□□□ 0.01
Clrn1Q8K445 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.11■□□□□ 0.01
Clrn1Q8K445 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.11■□□□□ 0.01
Clrn1Q8K445 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.11■□□□□ 0.01
Clrn1Q8K445 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn1Q8K445 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn1Q8K445 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn1Q8K445 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn1Q8K445 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn1Q8K445 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn1Q8K445 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn1Q8K445 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clrn1Q8K445 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clrn1Q8K445 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.1■□□□□ 0.01
Clrn1Q8K445 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Clrn1Q8K445 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clrn1Q8K445 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clrn1Q8K445 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Clrn1Q8K445 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clrn1Q8K445 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Clrn1Q8K445 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clrn1Q8K445 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clrn1Q8K445 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.1■□□□□ 0.01
Clrn1Q8K445 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Clrn1Q8K445 Gm27742-201ENSMUST00000184667 60 ntBASIC15.1■□□□□ 0.01
Clrn1Q8K445 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clrn1Q8K445 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Clrn1Q8K445 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clrn1Q8K445 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clrn1Q8K445 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clrn1Q8K445 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Clrn1Q8K445 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clrn1Q8K445 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clrn1Q8K445 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms