Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC18.8■□□□□ 0.6
Shtn1Q8K2Q9 Mir6956-201ENSMUST00000183598 62 ntBASIC18.8■□□□□ 0.6
Shtn1Q8K2Q9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.8■□□□□ 0.6
Shtn1Q8K2Q9 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC18.8■□□□□ 0.6
Shtn1Q8K2Q9 Gm44492-201ENSMUST00000197012 141 ntBASIC18.8■□□□□ 0.6
Shtn1Q8K2Q9 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shtn1Q8K2Q9 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shtn1Q8K2Q9 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shtn1Q8K2Q9 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shtn1Q8K2Q9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shtn1Q8K2Q9 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.8■□□□□ 0.6
Shtn1Q8K2Q9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shtn1Q8K2Q9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shtn1Q8K2Q9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shtn1Q8K2Q9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Shtn1Q8K2Q9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shtn1Q8K2Q9 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shtn1Q8K2Q9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Shtn1Q8K2Q9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shtn1Q8K2Q9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Gm27321-201ENSMUST00000185021 205 ntBASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Gm8396-201ENSMUST00000057361 823 ntBASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shtn1Q8K2Q9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Shtn1Q8K2Q9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shtn1Q8K2Q9 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shtn1Q8K2Q9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Shtn1Q8K2Q9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shtn1Q8K2Q9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Shtn1Q8K2Q9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shtn1Q8K2Q9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shtn1Q8K2Q9 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shtn1Q8K2Q9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Shtn1Q8K2Q9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.78■□□□□ 0.6
Shtn1Q8K2Q9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.78■□□□□ 0.6
Shtn1Q8K2Q9 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Shtn1Q8K2Q9 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Shtn1Q8K2Q9 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Shtn1Q8K2Q9 Mir6404-201ENSMUST00000183699 94 ntBASIC18.78■□□□□ 0.6
Shtn1Q8K2Q9 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC18.78■□□□□ 0.6
Shtn1Q8K2Q9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.78■□□□□ 0.6
Shtn1Q8K2Q9 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC18.78■□□□□ 0.6
Shtn1Q8K2Q9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shtn1Q8K2Q9 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shtn1Q8K2Q9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shtn1Q8K2Q9 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shtn1Q8K2Q9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Shtn1Q8K2Q9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shtn1Q8K2Q9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Shtn1Q8K2Q9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shtn1Q8K2Q9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Shtn1Q8K2Q9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shtn1Q8K2Q9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shtn1Q8K2Q9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Shtn1Q8K2Q9 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.77■□□□□ 0.6
Shtn1Q8K2Q9 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shtn1Q8K2Q9 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.77■□□□□ 0.6
Shtn1Q8K2Q9 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.77■□□□□ 0.6
Shtn1Q8K2Q9 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.77■□□□□ 0.6
Shtn1Q8K2Q9 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.77■□□□□ 0.6
Shtn1Q8K2Q9 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.77■□□□□ 0.6
Shtn1Q8K2Q9 Gm17271-201ENSMUST00000165535 355 ntBASIC18.77■□□□□ 0.6
Shtn1Q8K2Q9 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Shtn1Q8K2Q9 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.77■□□□□ 0.6
Shtn1Q8K2Q9 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.77■□□□□ 0.6
Shtn1Q8K2Q9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.77■□□□□ 0.6
Shtn1Q8K2Q9 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.77■□□□□ 0.6
Shtn1Q8K2Q9 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.77■□□□□ 0.6
Shtn1Q8K2Q9 Gm8825-201ENSMUST00000182565 998 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms