Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
Rtn1Q8K0T0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
Rtn1Q8K0T0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
Rtn1Q8K0T0 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.47■□□□□ 0.55
Rtn1Q8K0T0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.47■□□□□ 0.55
Rtn1Q8K0T0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.47■□□□□ 0.55
Rtn1Q8K0T0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.47■□□□□ 0.55
Rtn1Q8K0T0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn1Q8K0T0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn1Q8K0T0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.47■□□□□ 0.55
Rtn1Q8K0T0 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn1Q8K0T0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn1Q8K0T0 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn1Q8K0T0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn1Q8K0T0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn1Q8K0T0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn1Q8K0T0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
Rtn1Q8K0T0 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn1Q8K0T0 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rtn1Q8K0T0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rtn1Q8K0T0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rtn1Q8K0T0 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rtn1Q8K0T0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rtn1Q8K0T0 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rtn1Q8K0T0 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rtn1Q8K0T0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rtn1Q8K0T0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rtn1Q8K0T0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rtn1Q8K0T0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rtn1Q8K0T0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Rtn1Q8K0T0 Gm18669-201ENSMUST00000216049 778 ntBASIC18.46■□□□□ 0.55
Rtn1Q8K0T0 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.46■□□□□ 0.55
Rtn1Q8K0T0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rtn1Q8K0T0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rtn1Q8K0T0 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rtn1Q8K0T0 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rtn1Q8K0T0 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rtn1Q8K0T0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rtn1Q8K0T0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rtn1Q8K0T0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rtn1Q8K0T0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
Rtn1Q8K0T0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Rtn1Q8K0T0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rtn1Q8K0T0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Rtn1Q8K0T0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Rtn1Q8K0T0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtn1Q8K0T0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.45■□□□□ 0.54
Rtn1Q8K0T0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtn1Q8K0T0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Rtn1Q8K0T0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.45■□□□□ 0.54
Rtn1Q8K0T0 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.45■□□□□ 0.54
Rtn1Q8K0T0 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.45■□□□□ 0.54
Rtn1Q8K0T0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.45■□□□□ 0.54
Rtn1Q8K0T0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.45■□□□□ 0.54
Rtn1Q8K0T0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Rtn1Q8K0T0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtn1Q8K0T0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtn1Q8K0T0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtn1Q8K0T0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rtn1Q8K0T0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtn1Q8K0T0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtn1Q8K0T0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtn1Q8K0T0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtn1Q8K0T0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.44■□□□□ 0.54
Rtn1Q8K0T0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtn1Q8K0T0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtn1Q8K0T0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtn1Q8K0T0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rtn1Q8K0T0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.44■□□□□ 0.54
Rtn1Q8K0T0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtn1Q8K0T0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtn1Q8K0T0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.44■□□□□ 0.54
Rtn1Q8K0T0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rtn1Q8K0T0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.44■□□□□ 0.54
Rtn1Q8K0T0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.44■□□□□ 0.54
Rtn1Q8K0T0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rtn1Q8K0T0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtn1Q8K0T0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtn1Q8K0T0 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.44■□□□□ 0.54
Rtn1Q8K0T0 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rtn1Q8K0T0 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtn1Q8K0T0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtn1Q8K0T0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtn1Q8K0T0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtn1Q8K0T0 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.43■□□□□ 0.54
Rtn1Q8K0T0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rtn1Q8K0T0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rtn1Q8K0T0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rtn1Q8K0T0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rtn1Q8K0T0 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rtn1Q8K0T0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rtn1Q8K0T0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rtn1Q8K0T0 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Rtn1Q8K0T0 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rtn1Q8K0T0 Gm15165-201ENSMUST00000118140 502 ntBASIC18.43■□□□□ 0.54
Rtn1Q8K0T0 Gm12895-201ENSMUST00000122214 226 ntBASIC18.43■□□□□ 0.54
Rtn1Q8K0T0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.43■□□□□ 0.54
Rtn1Q8K0T0 Gm27867-201ENSMUST00000184778 125 ntBASIC18.43■□□□□ 0.54
Rtn1Q8K0T0 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.43■□□□□ 0.54
Rtn1Q8K0T0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms