Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim5Q8CI51 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim5Q8CI51 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim5Q8CI51 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Pdlim5Q8CI51 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim5Q8CI51 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pdlim5Q8CI51 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim5Q8CI51 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim5Q8CI51 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 App-207ENSMUST00000227737 2827 ntBASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim5Q8CI51 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim5Q8CI51 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim5Q8CI51 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Pdlim5Q8CI51 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim5Q8CI51 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Pdlim5Q8CI51 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim5Q8CI51 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim5Q8CI51 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim5Q8CI51 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim5Q8CI51 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Pdlim5Q8CI51 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.72□□□□□ -0.05
Pdlim5Q8CI51 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.72□□□□□ -0.05
Pdlim5Q8CI51 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Pdlim5Q8CI51 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
Pdlim5Q8CI51 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Pdlim5Q8CI51 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim5Q8CI51 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim5Q8CI51 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim5Q8CI51 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim5Q8CI51 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim5Q8CI51 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim5Q8CI51 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim5Q8CI51 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim5Q8CI51 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Pdlim5Q8CI51 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim5Q8CI51 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim5Q8CI51 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim5Q8CI51 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim5Q8CI51 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms