Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.52■□□□□ 0.23
Rp1l1Q8CGM2 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rp1l1Q8CGM2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rp1l1Q8CGM2 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rp1l1Q8CGM2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.52■□□□□ 0.23
Rp1l1Q8CGM2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.52■□□□□ 0.23
Rp1l1Q8CGM2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rp1l1Q8CGM2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rp1l1Q8CGM2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rp1l1Q8CGM2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rp1l1Q8CGM2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rp1l1Q8CGM2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.51■□□□□ 0.23
Rp1l1Q8CGM2 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rp1l1Q8CGM2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rp1l1Q8CGM2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rp1l1Q8CGM2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rp1l1Q8CGM2 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Rp1l1Q8CGM2 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rp1l1Q8CGM2 Gm12151-201ENSMUST00000121374 290 ntBASIC16.51■□□□□ 0.23
Rp1l1Q8CGM2 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.51■□□□□ 0.23
Rp1l1Q8CGM2 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.51■□□□□ 0.23
Rp1l1Q8CGM2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rp1l1Q8CGM2 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Rp1l1Q8CGM2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rp1l1Q8CGM2 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rp1l1Q8CGM2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rp1l1Q8CGM2 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rp1l1Q8CGM2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rp1l1Q8CGM2 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.51■□□□□ 0.23
Rp1l1Q8CGM2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rp1l1Q8CGM2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rp1l1Q8CGM2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rp1l1Q8CGM2 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.5■□□□□ 0.23
Rp1l1Q8CGM2 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rp1l1Q8CGM2 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.5■□□□□ 0.23
Rp1l1Q8CGM2 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.5■□□□□ 0.23
Rp1l1Q8CGM2 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rp1l1Q8CGM2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
Rp1l1Q8CGM2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rp1l1Q8CGM2 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rp1l1Q8CGM2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rp1l1Q8CGM2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rp1l1Q8CGM2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rp1l1Q8CGM2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rp1l1Q8CGM2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rp1l1Q8CGM2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rp1l1Q8CGM2 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.5■□□□□ 0.23
Rp1l1Q8CGM2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Rp1l1Q8CGM2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rp1l1Q8CGM2 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.5■□□□□ 0.23
Rp1l1Q8CGM2 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rp1l1Q8CGM2 Gm27437-201ENSMUST00000183429 107 ntBASIC16.5■□□□□ 0.23
Rp1l1Q8CGM2 Gm27618-201ENSMUST00000183671 60 ntBASIC16.5■□□□□ 0.23
Rp1l1Q8CGM2 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.5■□□□□ 0.23
Rp1l1Q8CGM2 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rp1l1Q8CGM2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rp1l1Q8CGM2 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rp1l1Q8CGM2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rp1l1Q8CGM2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rp1l1Q8CGM2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rp1l1Q8CGM2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.49■□□□□ 0.23
Rp1l1Q8CGM2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rp1l1Q8CGM2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rp1l1Q8CGM2 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rp1l1Q8CGM2 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rp1l1Q8CGM2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rp1l1Q8CGM2 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rp1l1Q8CGM2 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rp1l1Q8CGM2 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.49■□□□□ 0.23
Rp1l1Q8CGM2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rp1l1Q8CGM2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rp1l1Q8CGM2 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.48■□□□□ 0.23
Rp1l1Q8CGM2 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
Rp1l1Q8CGM2 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.48■□□□□ 0.23
Rp1l1Q8CGM2 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Rp1l1Q8CGM2 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.48■□□□□ 0.23
Rp1l1Q8CGM2 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.48■□□□□ 0.23
Rp1l1Q8CGM2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Rp1l1Q8CGM2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rp1l1Q8CGM2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rp1l1Q8CGM2 Grk6-207ENSMUST00000225925 2769 ntBASIC16.48■□□□□ 0.23
Rp1l1Q8CGM2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rp1l1Q8CGM2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Rp1l1Q8CGM2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rp1l1Q8CGM2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rp1l1Q8CGM2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rp1l1Q8CGM2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rp1l1Q8CGM2 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Rp1l1Q8CGM2 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Rp1l1Q8CGM2 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rp1l1Q8CGM2 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.48■□□□□ 0.23
Rp1l1Q8CGM2 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rp1l1Q8CGM2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Rp1l1Q8CGM2 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Rp1l1Q8CGM2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rp1l1Q8CGM2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.47■□□□□ 0.23
Rp1l1Q8CGM2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Rp1l1Q8CGM2 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rp1l1Q8CGM2 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rp1l1Q8CGM2 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms