Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb7Q8CDY9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb7Q8CDY9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb7Q8CDY9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb7Q8CDY9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb7Q8CDY9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhb7Q8CDY9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb7Q8CDY9 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Pcdhb7Q8CDY9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhb7Q8CDY9 Gm37722-201ENSMUST00000193757 208 ntBASIC16.12■□□□□ 0.17
Pcdhb7Q8CDY9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb7Q8CDY9 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb7Q8CDY9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb7Q8CDY9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Pcdhb7Q8CDY9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb7Q8CDY9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb7Q8CDY9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb7Q8CDY9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhb7Q8CDY9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb7Q8CDY9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb7Q8CDY9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb7Q8CDY9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb7Q8CDY9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb7Q8CDY9 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhb7Q8CDY9 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.11■□□□□ 0.17
Pcdhb7Q8CDY9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb7Q8CDY9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb7Q8CDY9 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb7Q8CDY9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb7Q8CDY9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.11■□□□□ 0.17
Pcdhb7Q8CDY9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.11■□□□□ 0.17
Pcdhb7Q8CDY9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb7Q8CDY9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb7Q8CDY9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb7Q8CDY9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb7Q8CDY9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pcdhb7Q8CDY9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb7Q8CDY9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb7Q8CDY9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb7Q8CDY9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb7Q8CDY9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb7Q8CDY9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb7Q8CDY9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb7Q8CDY9 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhb7Q8CDY9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhb7Q8CDY9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb7Q8CDY9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb7Q8CDY9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb7Q8CDY9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb7Q8CDY9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb7Q8CDY9 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb7Q8CDY9 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.1■□□□□ 0.17
Pcdhb7Q8CDY9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Pcdhb7Q8CDY9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb7Q8CDY9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb7Q8CDY9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb7Q8CDY9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdhb7Q8CDY9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb7Q8CDY9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdhb7Q8CDY9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.1■□□□□ 0.17
Pcdhb7Q8CDY9 Gm19891-201ENSMUST00000189771 303 ntBASIC16.1■□□□□ 0.17
Pcdhb7Q8CDY9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb7Q8CDY9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb7Q8CDY9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb7Q8CDY9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb7Q8CDY9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb7Q8CDY9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb7Q8CDY9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb7Q8CDY9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb7Q8CDY9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb7Q8CDY9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb7Q8CDY9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb7Q8CDY9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb7Q8CDY9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb7Q8CDY9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Pcdhb7Q8CDY9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhb7Q8CDY9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb7Q8CDY9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb7Q8CDY9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb7Q8CDY9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhb7Q8CDY9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhb7Q8CDY9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb7Q8CDY9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb7Q8CDY9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb7Q8CDY9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhb7Q8CDY9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb7Q8CDY9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb7Q8CDY9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb7Q8CDY9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb7Q8CDY9 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb7Q8CDY9 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb7Q8CDY9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb7Q8CDY9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb7Q8CDY9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb7Q8CDY9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb7Q8CDY9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb7Q8CDY9 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Pcdhb7Q8CDY9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb7Q8CDY9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhb7Q8CDY9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms