Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Q8CD60 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Q8CD60 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.83■□□□□ 0.29
Q8CD60 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Q8CD60 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.83■□□□□ 0.29
Q8CD60 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Q8CD60 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Q8CD60 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Q8CD60 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.83■□□□□ 0.28
Q8CD60 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Q8CD60 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.83■□□□□ 0.28
Q8CD60 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Q8CD60 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.83■□□□□ 0.28
Q8CD60 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.83■□□□□ 0.28
Q8CD60 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Q8CD60 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Q8CD60 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Q8CD60 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Q8CD60 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Q8CD60 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Q8CD60 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Q8CD60 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Q8CD60 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Q8CD60 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.83■□□□□ 0.28
Q8CD60 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Q8CD60 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q8CD60 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q8CD60 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Q8CD60 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q8CD60 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q8CD60 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Q8CD60 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q8CD60 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q8CD60 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q8CD60 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q8CD60 Rprl3-201ENSMUST00000157400 290 ntBASIC16.82■□□□□ 0.28
Q8CD60 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.82■□□□□ 0.28
Q8CD60 Gm18669-201ENSMUST00000216049 778 ntBASIC16.82■□□□□ 0.28
Q8CD60 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q8CD60 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q8CD60 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q8CD60 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Q8CD60 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q8CD60 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.81■□□□□ 0.28
Q8CD60 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8CD60 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Q8CD60 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8CD60 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8CD60 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8CD60 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8CD60 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8CD60 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.81■□□□□ 0.28
Q8CD60 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Q8CD60 Gm28033-201ENSMUST00000184224 96 ntBASIC16.81■□□□□ 0.28
Q8CD60 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.81■□□□□ 0.28
Q8CD60 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.81■□□□□ 0.28
Q8CD60 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8CD60 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.81■□□□□ 0.28
Q8CD60 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8CD60 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8CD60 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Q8CD60 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Q8CD60 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.81■□□□□ 0.28
Q8CD60 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8CD60 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8CD60 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8CD60 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8CD60 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Q8CD60 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8CD60 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8CD60 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q8CD60 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Q8CD60 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.8■□□□□ 0.28
Q8CD60 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q8CD60 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q8CD60 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q8CD60 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.8■□□□□ 0.28
Q8CD60 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q8CD60 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Q8CD60 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.8■□□□□ 0.28
Q8CD60 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Q8CD60 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Q8CD60 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Q8CD60 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.8■□□□□ 0.28
Q8CD60 Mir6404-201ENSMUST00000183699 94 ntBASIC16.8■□□□□ 0.28
Q8CD60 Gm27867-201ENSMUST00000184778 125 ntBASIC16.8■□□□□ 0.28
Q8CD60 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.8■□□□□ 0.28
Q8CD60 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.8■□□□□ 0.28
Q8CD60 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q8CD60 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q8CD60 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Q8CD60 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q8CD60 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q8CD60 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q8CD60 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Q8CD60 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q8CD60 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q8CD60 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q8CD60 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q8CD60 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms